Rosistilla carotiformis: Poly24_21620
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Entry
Poly24_21620 CDS
T09894
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rcf
Rosistilla carotiformis
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rcf03016
]
Poly24_21620 (rnd)
Enzymes [BR:
rcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Poly24_21620 (rnd)
Transfer RNA biogenesis [BR:
rcf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Poly24_21620 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
SDR-like
Motif
Other DBs
NCBI-ProteinID:
QDV68453
UniProt:
A0A518JSD4
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Position
2831879..2833120
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AA seq
413 aa
AA seq
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MVVDGLRDANPRTLLPTGRSLNHETITSREDLDRFCERLAKQPLIAFDTEFVSEDRYRPE
LCLLQVAAGDMLAIIDPIAIGTTQPFWDLISTAGRTVIVHAGREEMRFCWRFTGKPIAGC
FDVQLAAGFVGIEYPASLGNLVKTICGKTLGKGETRTDWRRRPLSEGQIEYALQDVIDLA
TLHSTIGKMVDDLQRRSWLDEEIATLQTTVANNEENESWHRVSGSSSLPPRQMAIIRELW
RWREARAQKTDQPARRVLRDDLIVELARRGSPDPKRINSIRGMERRNLQPHHEALAEAIG
IALDLDESELPVKPRGERRAKVPMLSQFLSTAIACVSRTHKMAPAIVGNADDVRELLTYE
MGGNKNAPKPALLRGWRGDVVGKAFRDVLDGRLAIRVANRQAEQPLEFIDVQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggttgtcgatggactccgcgatgcgaatcctcgaacacttttgcccaccggacgctcg
ttgaatcacgaaactatcaccagccgcgaagatctcgatcgattttgcgagcggctcgcc
aaacaaccgttgatcgccttcgataccgaatttgtttcggaggatcggtaccgccccgag
ctgtgtttgttgcaagtggctgctggcgacatgctggcgatcatcgacccgatcgcgatc
gggaccacccagccgttttgggatctgatctccactgccggtcgaacggtgatcgttcac
gccggacgcgaagagatgcggttctgttggcggttcaccggcaaaccgattgccgggtgc
ttcgacgtgcaattggctgccggctttgtcggcattgaatatcctgcgtcgttggggaat
ctggtcaagacgatctgcggcaagacgttgggcaaaggcgagacacggaccgattggcgt
cgccggccgctttccgaagggcagatcgaatacgcgctgcaggatgtgatcgatctggcc
acgctgcactccacgatcggcaagatggtcgacgacctgcaacggcgcagctggttggac
gaagagatcgcgacgctgcaaacgacggtcgcaaacaacgaagaaaacgagagttggcac
cgcgtgtcgggcagcagcagcctgccgccacggcagatggcgatcattcgcgaactgtgg
cgttggcgggaagcgcgcgcccagaagaccgatcaaccggcacggcgcgtccttcgcgat
gatctgatcgtcgaactggctcgacgtggcagccccgatccgaaacggatcaacagcatc
cgcggaatggagcgacgcaatctgcagccgcatcacgaagcgcttgccgaagcgattggg
atcgccttggatttggatgaaagtgaattgccggtcaaaccgcgcggggaacgccgtgct
aaggttccgatgctcagccagttcctgtcgacggcgatcgcttgcgtctcgcggacgcac
aagatggctccggccattgtggggaacgccgatgacgttcgcgaactgctgacttatgaa
atggggggcaacaagaacgctcccaaaccggcgctattgcgaggctggcgtggcgatgtc
gtgggcaaagccttccgcgatgtcctggatggtcgcttggcgatccgagttgccaatcgc
caggccgaacagccgctggaatttatcgacgtccaaccctag
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