Rosistilla carotiformis: Poly24_28400
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Entry
Poly24_28400 CDS
T09894
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Poly24_28400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_28400
Enzymes [BR:
rcf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Poly24_28400
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Poly24_28400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QDV69126
UniProt:
A0A518JUG1
LinkDB
All DBs
Position
complement(3767428..3768831)
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AA seq
467 aa
AA seq
DB search
MQSIHVDTFDDWRDAARRLLASGVSPTDVQWIGGAERSLFDDAPSPTAAEHGGRGTTPSV
PKAFLELARYVACHRESGRWSLLYRTLWRLTHGERHLLQVTTDDDVHQLMQMRKGVSRDI
HKMKAFVRFRKLETGGAEEQFVAWHRPDHRIVRLAAPFFARRFGGMHWSILTPDESVTWD
QTSLHYGPGVPASEAPNQDALEDLWKAYYASIFNPARVKVAAMKREMPVRHWPTLPEATL
IDDLLRQAPARADAMIQTNEGFAETAAHFMPERGDLVSLRLAAANCRACPLHQCATQTVF
GEGSPSARIVLVGEQPGDREDIQGHPFVGPAGKLLDEALKHAGIERREVYITNVVKHFKF
KETETPRGKRRLHQKPDSREIYACRPWLEAELAAIGPQVIVCLGATAAQALFGRDFAITK
DRGNVMRTDWCDITIATWHPAAILRMQDASRQTQMRTQLVEDLTSVK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccattcacgtcgatacctttgacgactggcgcgacgcagcgcgacgtctattg
gcgtcgggcgtttcaccgaccgacgtgcaatggatcgggggtgcagagcgatctctgttc
gatgacgcaccatcgccaaccgctgcggagcatggtggaagaggcacaacgccaagcgtt
ccgaaagcgtttctggagctcgcccgatacgtcgcctgccatcgcgaatcgggccgttgg
tcgttgctgtatcgaacgttatggcgtttaacccacggtgagcgtcatctgctgcaggtg
accacggacgacgatgttcatcaattgatgcagatgcgaaaaggggtctcccgcgacatc
cacaagatgaaagccttcgtgcgttttcgtaaactcgagaccggcggcgcggaggagcag
ttcgttgcttggcaccgtcccgaccaccggatcgttcgtttggccgcaccgttttttgca
cgtcgtttcggaggcatgcattggtcgatcctcaccccggacgaatcggtgacttgggat
cagacttcgttgcactacggaccgggagtgcccgcttcggaagctcccaaccaggacgcg
ttggaagatctgtggaaggcctattacgcatcgatcttcaatccggcacgcgtgaaggtc
gccgcgatgaagcgtgagatgcccgtgcgacattggcccacgctgcccgaagccacgctg
atcgacgatctgttgcggcaggcacctgcccgcgctgacgcgatgattcaaactaacgaa
ggttttgccgaaacggcggcccacttcatgcctgagcgtggcgacttggtgtcgctgcgt
cttgcggccgccaactgccgtgcctgtccgttgcaccagtgtgccacgcaaacggtcttc
ggcgaaggttcgccgtcggctcgcatcgtgttggtcggagaacaacccggcgaccgcgaa
gatatccaggggcatccgtttgtcggcccggcgggcaagttgctcgacgaagcactgaaa
cacgcagggatcgagcgtcgcgaagtttacatcaccaacgttgttaaacacttcaaattt
aaggaaaccgagactccgcgtggcaagcggcgtttgcatcagaaaccggattcgcgagag
atctacgcctgtcggccttggttggaagcggagcttgccgcgatcggtccccaggtgatt
gtttgtctgggagcaaccgcggcccaagcgttgtttgggcgcgactttgccatcacgaaa
gatcgaggaaacgtgatgcgaaccgattggtgcgacatcacgatcgcaacttggcatccg
gcagcgattctgcggatgcaagatgcgtcgcgacaaacgcagatgcggacgcagcttgtc
gaagatttgacatcggttaagtag
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integrated database retrieval system