Entry |
|
Symbol |
alkA
|
Name |
(GenBank) DNA-3-methyladenine glycosylase
|
KO |
|
Organism |
rcf Rosistilla carotiformis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:rcf00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Poly24_28810 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:rcf03400]
Poly24_28810 (alkA)
Enzymes [BR:rcf01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Poly24_28810 (alkA)
DNA repair and recombination proteins [BR:rcf03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Poly24_28810 (alkA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3823938..3824579)
|
AA seq |
213 aa
MSRTAKIQAAIEHLRAADPVMNGIIDDVGAFAMRLEKDRYTMLVRSIISQQISTGAARSI
RMRLVELAGPDGITPTNLSRLSVDDLRTAGISMQKARYLLDLTGKVMAEELQLKSIGRYS
DAEVIERLTIVKGIGKWTAQMFLIFSLGRLDVYPHDDLGVRTAIQRRYALETLPAPKTGH
EIAALWRPYASVASWYCWQSLEHDKRAAANGKR |
NT seq |
642 nt +upstreamnt +downstreamnt
atgtcaagaactgcgaaaatccaagcggccatcgagcatttgcgtgccgccgatccggtc
atgaacggaatcatcgacgatgtaggggcgtttgcgatgcggttggagaaggaccgctac
acgatgttggtgcgatcgatcatctcccaacaaatctcgacgggggcagcgcgttcgatt
cgcatgcggttagtcgaattggccggtcccgatgggatcacgcccaccaatctctcccgc
ttgtccgtggatgatttacggacggcggggatttcgatgcagaaagcgagatatctgctg
gacctgaccggcaaggtgatggcggaagaattgcaattgaaatcaatcggtcggtactcg
gacgcggaggtcatcgaacgattaacgattgtcaaagggatcgggaaatggaccgctcaa
atgtttttgatcttctcgttgggaaggctggacgtctatccgcatgacgatcttggcgtg
cgtacggcaatccagcgacgctacgctttggaaaccttgcccgccccaaagacggggcac
gagatcgccgcgttgtggcgaccgtatgcgtcggttgccagttggtattgttggcagtcg
ttggaacacgataaacgcgctgcggcgaatggcaagcggtaa |