Rosistilla carotiformis: Poly24_40770
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Entry
Poly24_40770 CDS
T09894
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcf
Rosistilla carotiformis
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcf03032
]
Poly24_40770 (topA)
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_40770 (topA)
Enzymes [BR:
rcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Poly24_40770 (topA)
DNA replication proteins [BR:
rcf03032
]
Prokaryotic type
DNA Topoisomerases
Poly24_40770 (topA)
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Poly24_40770 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Rubredoxin
Motif
Other DBs
NCBI-ProteinID:
QDV70356
UniProt:
A0A518JXU0
LinkDB
All DBs
Position
complement(5416554..5419295)
Genome browser
AA seq
913 aa
AA seq
DB search
MAKRSAKKYAFDPKEVTGKHLVIVESPTKAKTINKYLGNDYFVMASVGHVRDLPKSAPKG
AKRKDHPVPGVDLQNNFSPTYEVMPDKKPTVTNLQKAAKQAQDVWFATDLDREGEAIAWH
LAEALGVPTAQAKRVVFNAITKGDIARAFQNPRTIATNVVNAQQARRIVDRIVGYQVSPL
LWRKVAGGLSAGRVQSVAVRLVVEREREIEAFIPDEFWKINALFATDLAKTGEIAGKWSS
WSGEEERTLKQQNEWLSQQKCLRAELVRFGGAKFEPSDRAVALDAAQQLGFSLDEAIETE
DPKGKGPAKNRVTFVGKVGDAPEYKITSIETRRTTSRPSPPFITSTMQQAAANRLGFQLQ
RTMRTAQQLYEGIDLKGTRGQTGLITYMRTDSTHLSGEALDMSRTFIEQNYGKDYLPEKP
NFYKSSNKDAQEAHEAIRPTDATLTPAMVKSHLSDEQYKLYKLIWERFISCQMLPAQWDS
TSIEIQPTGVDATLKASGRTLVFDGFYRASGVPTSDDIVLPKLNEGEQLGPMEIDPQQKF
TSPPPRFTEASLQKRLEEEGIGRPSTYAAIISTIQDRKYVEPVAQRDRRLKATDIGKVVT
DKLVEAFPEIMDVGYTRRMEAGLDEIETGQEEWQKLLHRFYDPFKDALEQAMENTSHAKA
EFEPAPDHLKCPKCGAPTCYRFGRNGRFLGCTKFMVEPVEVQAEGHDGTYLLQKARGKAR
PQLLHKETSAKLGWMKLTKDDKAKFQKISDEMPERCDYAAPIDSDGNPMLPEETDVLCPE
DGTPLIKRTGRFGPFLASQNYPEVKFILKLDPKKGTVVLPKTEPMVSELTCPKCEEHPLY
VRDSKRGLWLSCSSFPKCRGRVGFSSLEEDQQKKIEADWAAWVEAHPLPVIKTIEGQVVE
DGYEPKLHTIAPA
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacgctccgctaagaaatacgcatttgatccgaaagaagtcaccgggaaacac
ctggtgattgtcgaatcgccgaccaaggcgaagacgatcaataaatacttgggcaacgat
tatttcgtgatggcctcggtgggccatgtccgcgatctgcccaagagtgctcccaaggga
gccaagcggaaggaccatcccgttccaggggtcgacctgcagaacaacttctcgccgacc
tacgaggtgatgcccgataagaagccgacggtcaccaatctgcaaaaagctgccaaacaa
gcccaagacgtctggttcgcgaccgacctcgaccgcgagggagaggcgatcgcttggcat
cttgccgaagcgttaggcgtccccaccgcgcaagctaaacgcgttgtcttcaacgcgatc
accaagggcgatatcgcccgagcgttccagaacccgcgaacgatcgcgaccaacgtcgtc
aatgcgcaacaagcccgccggatcgtcgatcggatcgtcggctaccaagtctcgccgctg
ctgtggcggaaggtcgcgggcggcctgagcgccggccgcgtccaatcggtcgccgtccgt
ttggtggtcgaacgcgaacgggagatcgaagctttcattccggacgagttctggaagatc
aacgcgctgtttgccaccgacctggcgaaaaccggggagatcgctggcaaatggagcagc
tggagcggcgaggaagagcgaacgctgaagcagcaaaacgaatggctcagccaacagaag
tgtctccgcgccgaactggtccgtttcggcggagccaagtttgaaccgagcgaccgcgcc
gttgcactcgacgcagcccaacagcttggtttctcgctcgacgaagcgatcgaaaccgaa
gatcccaaaggcaagggcccggcgaagaaccgcgtcacttttgtcggcaaagtcggcgat
gcccccgaatacaagatcacgtcgatcgaaacgcggcgaacgaccagccgcccttcgccg
ccgtttatcacttcgacgatgcagcaggctgcggccaaccggctcggtttccaactgcag
cgaacgatgcgcacggcacaacagctgtatgaaggtatcgatctgaaggggactcgcggt
cagaccggtctgatcacctacatgcgtaccgattcgactcacttgtcgggcgaagcgctc
gacatgtctcggactttcatcgagcagaactacggcaaggactacctgcccgaaaaaccg
aacttctacaaatcgtcgaacaaagacgcgcaggaagctcacgaagcgatccggccaacc
gacgccacgttgactcccgcaatggtcaagtcgcacctcagcgacgagcagtacaaactg
tacaaactgatttgggagcggttcatctcgtgccagatgttgcccgcgcagtgggattcg
acatcgatcgagatccagccaaccggcgtcgatgcgacgcttaaggcgagcggccgaacg
cttgtcttcgacggcttctaccgcgcgtcgggcgttccaaccagcgacgacatcgtgttg
ccaaagttgaacgaaggggaacaactggggccgatggaaatcgatccacaacagaagttc
accagcccaccgccacgattcaccgaagccagcttgcagaagcggctcgaggaagaaggg
atcggccggccgtcgacttacgcggcgattatcagcacgattcaggaccgcaaatacgtc
gaaccggtcgcccaacgcgatcgccgtctgaaggcgaccgatatcggcaaagttgtcacc
gacaagcttgtcgaagcgttccccgagatcatggatgtcggttacacgcggcggatggaa
gccggactcgacgagatcgaaaccggccaggaagagtggcagaaactgctgcaccgcttc
tacgatccgttcaaagacgccttggaacaggcgatggagaacaccagccacgcgaaggcg
gagttcgaaccggcaccggatcatctgaagtgccccaaatgcggcgccccaacctgctac
cgatttggccgcaacggacgcttcctcggctgcaccaagttcatggtcgaaccggtcgaa
gtgcaagccgaagggcacgacggaacctatctgttgcagaaggcccgcggcaaggcgcgg
ccacaattgctgcacaaggaaacgtcggccaagttgggttggatgaagctgaccaaagac
gataaggcgaagtttcaaaagatctccgacgagatgcccgagcgatgcgattatgccgcg
ccgatcgacagcgacggcaacccgatgctgcccgaggagaccgacgtgttgtgccccgaa
gatggcacgccgctgatcaaacggaccggtcgttttgggcccttcctggctagccaaaac
taccccgaggtgaagttcatcttgaagctggatccgaagaaaggaaccgtcgtcctgccg
aagaccgaaccgatggtcagcgaattgacgtgccccaaatgcgaagagcatccgctgtac
gttcgtgacagcaaacgcgggctgtggctctcttgttccagtttccccaagtgccgcggt
cgcgtcggattttcgtcgctggaagaggatcaacaaaagaagatcgaagccgattgggcc
gcgtgggttgaggcccatccgttgccggtgatcaagacgatcgaaggccaagtcgtcgaa
gatggctacgagccaaagctgcatacgatcgcgccagcttaa
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