Rosistilla carotiformis: Poly24_42970
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Entry
Poly24_42970 CDS
T09894
Symbol
rpoA_3
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Poly24_42970 (rpoA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcf03021
]
Poly24_42970 (rpoA_3)
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_42970 (rpoA_3)
Enzymes [BR:
rcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Poly24_42970 (rpoA_3)
Transcription machinery [BR:
rcf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Poly24_42970 (rpoA_3)
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Poly24_42970 (rpoA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QDV70573
UniProt:
A0A518JYG0
LinkDB
All DBs
Position
5707022..5708011
Genome browser
AA seq
329 aa
AA seq
DB search
MHIRWRGMELPSTVEVDRDTLSPTYGKFVAEPFERGFGNSVGNSLRRVLLSSLEGSAVTQ
IKVHGAQHEFSSIAGVMEDVTEIVLNVKSLIVRNHSESTRVITVQRNTAGDVTGNDVQTD
QDVEIINNNHILATLTEDVPFMMEMVVENGRGYVPSTEHSTGEHEIGIIPIDAVFSPVTR
VRYEVEETRVGQKTNYDRLIMEIWTDGTVGPELALTESAKIMRKHLNPFVQYTELGPGIH
TVARGGANSAEAQLEAKLNMPISDLRLSVRAGNCLESEQIRTVRDLVVRTEDQLIEVRNF
GDTTLNEVRDKLNALGLHLGMRVPTGGLM
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcacattcgttggcgtggaatggaattgcccagcacggtcgaagtcgatcgtgataca
ttgtctcccacctacggcaaatttgtggccgaaccgttcgagcgtggctttggcaacagc
gtcggcaatagcttgcgtcgcgtgttgctgtcgagcctcgaaggaagcgcggtcactcag
attaaggtgcacggagcccaacacgaattcagctcgatcgctggcgtgatggaagatgtt
accgaaatcgttttgaatgtaaaaagcttgatcgttcgcaatcatagcgaatcgactcgc
gtgatcaccgtacagcggaacaccgctggcgacgtcaccggtaacgatgtgcaaaccgat
caagatgttgaaatcatcaacaacaaccacatcctggcaacgttgaccgaagacgtgcca
ttcatgatggaaatggtcgttgaaaatggtcgcggttatgttccgtcgaccgaacacagc
actggcgaacacgaaatcggaatcattccgatcgacgcggtcttcagccccgtgacccgc
gttcgctacgaagtcgaagagacacgcgtcggtcaaaagacgaactacgatcgtttgatc
atggaaatctggaccgacggcaccgtgggtcccgaactggcgttgaccgaatcggccaag
atcatgcgaaagcacttgaacccattcgtgcaatacaccgaactgggccctggaattcac
actgtcgctcgcggcggagcgaattcggctgaggcacaactggaagccaagctgaacatg
ccgatcagcgatctgcgtctttcggtccgtgcaggcaactgcttggaatccgaacagatc
cgcaccgttcgcgatttggtggttcgcaccgaagatcaattgatcgaagtccgcaacttt
ggcgatactacactgaacgaagttcgcgacaagctcaatgcgttgggattgcatctgggg
atgcgggttccaaccggcgggttgatgtaa
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