| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta'
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| KO |
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| Organism |
rcf Rosistilla carotiformis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rcf00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Poly24_43460 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rcf03021]
Poly24_43460 (rpoC)
03400 DNA repair and recombination proteins [BR:rcf03400]
Poly24_43460 (rpoC)
Enzymes [BR:rcf01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Poly24_43460 (rpoC)
Transcription machinery [BR:rcf03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Poly24_43460 (rpoC)
DNA repair and recombination proteins [BR:rcf03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Poly24_43460 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5770588..5774928
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| AA seq |
1446 aa
MSNGESTTYDRINDYASVKINLARPQDIRGWSFGEVKKPETINYRTYRPEKDGLFCERIF
GPEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPIVHIWFFKAMPS
RLGNLLSMKTTSLEKVIYFQDYVVVDPGQTDLELQQMLTEEEYRAAKAQWGDNAFEADMG
AEAVRKLLGKLDLVALSEKLRVDLEETGSKQKAKDLINRLKIVESIRDSDNRPEWMVLDV
IPVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLRKLVDLNAPEVIIRNEKRMLQQ
SVDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPRL
KLHQCGLPKKIALELYQPFIIRKLKELGHADTIKSAKKMLERKDEEVWDILETVIRNHPV
MLNRAPTLHRMGIQAFEPTLVEGNAINLHPLVCKGFNADFDGDQMAVHLPLSIEAQVEAH
TLMLSTNNIFAPSNGKPIMSPSQDMVMGCYFITVELPDQKGEGMTFSCAEEAEMAYREGV
IALHAKIRVRLPKYRKIKTPDDSAKGGQIIDTTYGRIMFNEMLPLGMDYYNQAMRSGDLA
SAISDTYQRLGRKATIQVLDDMMQLGFRESTRSGLSFATDDLVTPDSKIKFIAEAEKEVM
KQRKNYDRGLITGDERYKKVLDTWTGAREKITTDMMHAMEHDFRPGGWYVNPVYLMAHSG
ARGGIEQIRQLGGMRGLMAKPSGEIIETPIKANFREGLTVLEYFSSTHGARKGLADTALK
TADSGYLTRKLADVAQNVVITMEDCGTTQGITKNVIYRGEKVEVRLADSINGRVSRQNIV
DPITDEVIVRESEMITPEIARKIEEMGLEKIQVRSPMTCDAPLGICRRCYGMDMATGSLV
EEGMAVGIIAAQSIGEPGTQLTMRTFHIGGSVDVAMEDSDIRAQKGGFVRLTRLRAVINE
EGQLVALTRNGEIAVVDDRGREIEKHEVPTGATLPVKDGEEVKAGAILCEWNPHSVPILA
EVDGKVRFDDIVEGETMKLEREASGNMRMTIMEHKGELHPQIVIEDATGATLNVQYLPER
AVIKIKEGAQIKTGSALAEMPRESGGVSDITGGLPRITEIFEARKPKEPAVIAEVDGTVE
ILAEKKRGKRTIVVRSESGIEREHLVPHGKRFLVHTGDIVRAGQALIDGPLVPHDILRVS
GEEAVQQYLLHEVQQVYRSQRVEINDKHVEIIIARMLRKVKIESSGNTSILPGLIMDRFE
FRRANQSMGKCVKISDKGDSDFGEGSIIPKETFEQTNAEIEALGGSPARGKKPRGATAST
QLLGITKASVQSSSFISAASFQETTKVLTEAALAGKVDRLVGLKENVILGHLIPAGTGFR
IFQDSEVSYRREAMEELAGTAPQQLEESFPLLADGAPPADDNGSQSSSPASVQTLDSLLG
GSGSDE |
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| NT seq |
4341 nt +upstreamnt +downstreamnt
atgtccaacggcgaaagcaccacttacgaccgcatcaatgattacgcctcggtcaagatc
aacctggcccgcccgcaagacatccgcggctggtcgtttggtgaggtcaagaagccagag
acgatcaactaccgtacctaccgtcccgagaaggatggtctgttctgcgagcggatcttt
ggccctgaaaaggactgggagtgcgcctgcggtaaataccgtggcatgaaatacaaggga
atgatctgcgatcgttgcggcgtgaaagtcacgcacagccgcgttcgtcgtaagcgcatg
ggccacatcgaattggctgcgccgatcgttcacatctggttcttcaaagcgatgcccagc
cgcttgggtaacctgttgagcatgaagacgaccagcctggaaaaggttatctacttccag
gactacgtcgttgtcgacccaggtcaaaccgacctcgaactgcaacaaatgctgaccgaa
gaagagtatcgcgccgccaaggctcagtggggcgacaacgccttcgaagccgacatgggt
gccgaagcggtccgcaagctgttgggcaaactggatctggtcgcgctatcggaaaaactg
cgcgtcgatctggaagagaccggcagcaagcagaaagccaaggatctgatcaaccgcttg
aagatcgtcgaatcgatccgcgacagcgacaaccgtcccgaatggatggtcctggacgta
atccccgtgatcccgcccgacctgcgtcctctggttctgctggacagcggcaacttcgcg
accagcgacttgaacgacctctatcgccggatcatcaaccggaacaaccggttgcgtaag
ttggtcgacttgaacgcgcccgaagtgatcattcgcaacgaaaagcggatgttgcaacaa
tcggtcgacgcgctgttcgacaacaaccgttgcaagcgtccggttctgggcagcagcaat
cgtccgctgaaatccttgaccgacatgatcaagggtaaacagggtcgtttccgtgaaaac
ctgctgggtaaacgcgtcgattattccgctcgttcggtaatcgtcgtcggtcctcgtttg
aagctgcaccaatgcgggcttcccaagaagatcgcgctggaactgtaccaaccgttcatc
attcgtaagctgaaagagctgggtcacgccgacacgatcaaatcggcgaagaagatgctc
gagcgaaaagacgaagaggtttgggacatcctggaaaccgtcatccgcaaccacccggtg
atgttgaaccgggctcctacgttgcaccggatgggtatccaggcgttcgaaccgaccttg
gtcgaagggaacgcgatcaacctgcacccgctggtttgcaaaggcttcaacgccgacttc
gacggcgatcagatggcggtccacttgccgctttcgatcgaagcacaggtcgaagcgcac
acgttgatgttgagcaccaacaacattttcgcgccgtccaacggtaagccgatcatgagt
ccgtcgcaggacatggtgatgggttgttacttcatcacggtcgagctgcccgatcaaaag
ggcgaaggcatgaccttcagctgtgccgaagaagccgaaatggcttatcgcgaaggcgtc
atcgcgctgcacgcgaagattcgcgtacggttgccgaagtatcgcaagatcaagactccc
gacgattcggccaagggtggtcagatcatcgacacgacctacggacgcatcatgttcaat
gagatgctgccgctgggaatggactactacaaccaagcgatgcgttcgggcgatctcgcc
tcggcgattagcgacacttaccaacgtctgggtcgtaaagcgacgatccaagtgttggac
gacatgatgcagctcggcttccgcgaatcgactcgtagcggtttgtcgtttgcgaccgat
gatcttgtaactcccgattcgaagatcaagttcatcgccgaagctgaaaaagaggtgatg
aaacaacgcaagaactacgatcgcggtttgatcaccggcgacgagcggtacaagaaggta
ctcgatacctggaccggcgcccgtgaaaagatcaccaccgacatgatgcacgcgatggaa
cacgatttccgtccgggcggttggtatgtgaaccctgtatatctgatggcccactccggt
gctcgtggtggtattgaacagattcgtcagctgggcggtatgcgtggtctgatggcgaag
ccgtccggtgagatcatcgaaacgccgattaaggcgaacttccgtgaaggtctgacggta
ctggaatacttcagttcgacgcacggtgctcgtaaaggtctggccgatacggctttgaag
accgctgactcgggttacctgacgcgtaagctggccgacgtcgcccaaaacgtggtcatc
acgatggaagactgcggtaccacgcaaggtatcaccaaaaacgtgatttaccgtggtgag
aaggtcgaagtacgcttggccgacagcatcaacggtcgcgtcagtcgccagaacatcgtc
gatccgatcaccgacgaagtgatcgtccgcgaaagcgaaatgatcactccggaaatcgct
cgcaagatcgaagagatgggcctggagaagatccaagtccgcagcccgatgacctgcgat
gcaccgctgggtatctgccgccgttgttacggaatggatatggcgacgggatcgttggtc
gaagaaggcatggccgtcggtatcatcgccgctcaatcgatcggtgaaccgggtacacag
ctgacgatgcgtacgttccacatcggtggttcggtcgacgtcgcgatggaagatagcgac
atccgcgctcagaagggtggattcgttcgcttgactcgcttgcgtgcggttatcaacgaa
gagggccagttggtcgcgttgacccgtaacggtgaaatcgcggttgtcgatgatcgcggt
cgcgagatcgaaaagcacgaagtccccaccggtgcaacgctgcctgtgaaggatggcgaa
gaggtgaaagccggtgcgatcctttgcgaatggaacccgcacagcgtgccgattcttgcc
gaggtcgacggaaaggttcgcttcgacgacatcgtcgaaggcgaaacgatgaagctggaa
cgcgaagccagcggtaacatgcgtatgacgatcatggaacacaagggtgaactgcaccct
cagatcgtgatcgaagacgccaccggcgcgacgctgaacgttcaatacctgcccgaacgt
gcggtcattaagattaaggaaggtgctcagatcaaaaccggttcggcgttggcggaaatg
ccacgtgaatcgggcggtgtatcggacatcaccgggggtctgcctcggattaccgagatt
ttcgaagctcggaagccgaaggaacctgcggttatcgccgaagtcgacggtaccgttgaa
atcttggccgaaaagaaacgtggcaagcgtacgattgtcgtccgcagcgaaagcggcatc
gaacgcgagcacttggtgccgcacggtaagcgattcttggtccacaccggcgacatcgtc
cgtgcgggtcaggccctgatcgatggtccgttggtacctcacgatattcttcgcgtctcg
ggcgaagaagccgttcaacagtacctgctgcacgaagttcaacaggtctaccgttcgcaa
cgtgtggaaatcaacgataagcacgttgagatcatcatcgcacggatgttgcgtaaggtg
aaaatcgaatcgtccggtaacaccagcatcctgcctggcttgattatggaccgtttcgaa
ttccgtcgcgccaaccaatcgatgggcaaatgcgtcaagatcagcgacaagggtgacagt
gatttcggcgaaggttcgatcattccgaaggaaaccttcgaacagaccaatgccgaaatc
gaagccctgggtggttctcccgctcgcggcaagaaaccacgtggtgcaacggccagtacc
cagttgttaggtatcaccaaggcatcggtgcaatcgagcagctttatctcggcggcatcg
ttccaagaaacgacgaaggtcctgaccgaagcggcgttggccggcaaggtcgaccgcctg
gttggtttgaaggaaaacgtgatcctgggacacttgatccccgccggtaccggattccgc
atcttccaagattcggaagtcagctaccgtcgcgaagcgatggaagaactggccggaacc
gcaccgcaacaactggaagaaagcttcccgctgttggccgatggggctccgcccgccgat
gacaacggttcgcaatcctcgtcgccagccagcgtccaaaccctggacagtctgttgggc
ggtagcggatcggacgaatag |
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