Rosistilla carotiformis: Poly24_44510
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Entry
Poly24_44510 CDS
T09894
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Poly24_44510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rcf03021
]
Poly24_44510
03019 Messenger RNA biogenesis [BR:
rcf03019
]
Poly24_44510
Transcription machinery [BR:
rcf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Poly24_44510
Messenger RNA biogenesis [BR:
rcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Poly24_44510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Spore_III_AA
S1CSD-TOTE-2
OB_RNB
Rho_N
NACHT
Motif
Other DBs
NCBI-ProteinID:
QDV70725
UniProt:
A0A518JYX0
LinkDB
All DBs
Position
complement(5905478..5906974)
Genome browser
AA seq
498 aa
AA seq
DB search
MEPRKPNRHISSRPLQRGRNQNFGGAARQRHPDAEVDQRIRELDAERDPLSLPEEIVVEA
TRSGGSVGVPQQRSDDAPLNLAHLQLLSREELVALAEAEGVTDIEKCSRLDLSFSVLKRR
MANNGLMYGEGTLEILPDGFGFLRSPDAHYISCPDDIYVSPSQIRRFGLQTGSSVAGQIR
PPKENERYFALLRVEAINRRDPMDRQRNTRFEDLTPLHPNARIIMETDAHEMSTRVIDLL
APIGFGQRGLIVSPPRAGKTVLMQKMARSVLENYPDAYVIVLLVDERPEEVTDMEREVKG
PHCEVISSTFDEPPARHIQVAQMVIEKAKRMVEYGIDVVIFLDSITRLGRAYNSEGGGTG
KLLSGGLDAGALQKPKAFFGSARKLEEGGSLTILATALVDTGSRMDDVIFEEFKGTGNME
IVLDRNLVDRRIWPSIDPGRSGTRREEMLMDDEEHRRISILRRVMAELNPPEAMDMLIKQ
LKKTQNNAEFLLSLKEVD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcgcaaacccaaccgccacatttcgtcacgaccactgcaacgcggccgcaac
caaaattttggtggcgcagcgcgacagcgtcatcccgacgcggaggtggatcaacgaatc
cgtgagctcgatgccgagcgcgacccactgtcgttgcccgaggagatcgtggtcgaagcg
acccgctccggtggttcggtcggcgtgccgcagcaacgcagcgacgatgcgccgctgaat
ctagcgcatttgcagttgttgtcgcgcgaggaacttgtcgctttggccgaggccgaaggg
gtgaccgacatcgaaaaatgcagccgcttagatctcagcttcagcgtgctcaaacggcgg
atggccaacaacggcttgatgtacggcgagggaacgctggagatcctgcccgacgggttt
gggttcttgcgcagccccgacgcccattacatctcctgccccgacgacatttatgtctct
cccagccagatccgccgtttcggtttgcaaaccggcagctcggtcgctggacagatccgt
cccccaaaagagaacgaacgctactttgcgttgctccgcgtcgaagcgatcaaccgccgc
gatccgatggaccgccaacgcaacacgcggttcgaggacctgactccactgcatcccaac
gcgcggatcatcatggagaccgatgcgcacgagatgtcgactcgggtgatcgacctgctg
gcgccgatcgggtttggccaacgcggcttgatcgtcagtccgccgcgagcgggcaagacc
gtcctgatgcagaagatggctcgctcggtcctggaaaactatcccgacgcctacgtgatc
gtgttgcttgtcgacgagcgtcccgaagaggtcaccgatatggagcgggaggtcaaaggc
ccgcactgcgaagtcatcagcagcacgttcgacgaaccaccggcgcgacacattcaagtc
gctcagatggtgatcgagaaggcgaagcgaatggtcgaatacggcatcgacgtcgtgatc
ttcctcgactcgatcacacgcctaggccgcgcttacaattccgagggtggcggcaccggc
aagctgctttccggtggtttggacgccggggcgttgcagaaacccaaagctttcttcgga
tcggctcgcaagctggaagagggtggatcgctgacgatcctcgcaaccgcacttgtcgac
accggcagtcgcatggacgacgtgatctttgaagaattcaaagggaccggcaacatggag
atcgtgctggatcgcaatctggtcgatcgacgaatctggccctcgatcgatccgggccgc
agcggcacgcgtcgcgaggagatgctgatggatgacgaagagcatcgtcggatcagcatc
ttgcggcgtgtgatggcggaattgaatccgcccgaagcgatggacatgttgatcaaacaa
ctcaagaagacccaaaacaacgccgagtttttgctcagcctcaaggaagtcgattga
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