Rosistilla carotiformis: Poly24_51120
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Entry
Poly24_51120 CDS
T09894
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Poly24_51120 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rcf03019
]
Poly24_51120 (cshA)
03009 Ribosome biogenesis [BR:
rcf03009
]
Poly24_51120 (cshA)
Enzymes [BR:
rcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Poly24_51120 (cshA)
Messenger RNA biogenesis [BR:
rcf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Poly24_51120 (cshA)
Ribosome biogenesis [BR:
rcf03009
]
Prokaryotic type
rRNA helicases
Poly24_51120 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
RING_CBP-p300
Motif
Other DBs
NCBI-ProteinID:
QDV71377
UniProt:
A0A518K0S1
LinkDB
All DBs
Position
complement(6819751..6821049)
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AA seq
432 aa
AA seq
DB search
MPSSRERVSILSQNMESTSSEPSLSFSDLDLSPIMLRALKICQFENPSPIQAGLIPLALE
GEDVIGQARTGTGKTAAFGIPILEQLDPLEDRCLPQALILVPTRELADQVGQELTRLAKG
VPTSIAVLAGGKNLRKQTQQLSDGVQVVVGTPGRVHDHLQRGTFKTHDIWCVVLDEADRM
LDIGFRPQIERILRKCPKDRQTLLLSATMAPQVRILAERYMFEPKTVDCSSKDMSVETIE
QHYFTVDADKRLELLMRLLDRETPEQVIIFCRTKRGTDKLHRKLSEKYDGVGCMHGDMQQ
RERDRVIKQLRSKDLKVLVATDVVGRGIDITTISHIINFDVPQDCDDYVHRVGRTGRMGR
DGVAYTFIVPGEGDVLTSIEQRINKQLIKDVMDGFDHPVPVNRVAQAQEAEKPKEPGRPK
LNRIVRHTRKRF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgccttcgtcgcgcgaacgcgtctccattctcagtcaaaacatggaatcaacctcttcg
gagccatcgctgtccttcagcgatctcgatctttcgcccatcatgcttcgggcgttaaag
atatgccagttcgagaacccgtcaccaatccaagcggggctgatcccgcttgcgttggaa
ggggaggatgtgatcggccaagcgcggaccggtaccggcaagaccgccgcgttcggcatt
ccgatcctggaacaactcgatccgttagaggatcgctgcctgccgcaagccctgattctg
gtgccgacgcgcgaactggccgatcaggtcgggcaggaactgacccgcttggcgaagggg
gtgcctaccagcatcgccgtattggcaggcggtaagaaccttcgcaagcagacccagcag
ttaagcgatggcgtgcaggtcgttgtcgggacgcccggccgcgtgcacgaccatctgcag
cgcgggaccttcaaaacccatgacatctggtgcgtggtgctggatgaggccgaccggatg
ctcgatatcgggttccgtccgcagatcgaacggatcctgcgaaaatgtcctaaagaccgg
caaacgttgctgctttcggcaacgatggcgccgcaggttcgcatcttggccgaacgctat
atgttcgaacccaagacggtcgactgcagttcgaaggacatgtcggtcgaaacgatcgaa
cagcattactttaccgtcgacgcggataaacggctggagttgttgatgcgtctgctggat
cgtgagacgcccgagcaggtgatcatcttctgtcggacgaagcgtggtaccgacaagttg
catcgcaagctgagcgaaaagtatgacggtgtcgggtgtatgcatggcgatatgcagcag
cgcgaacgcgatcgcgtgatcaagcaactgcgtagcaaggatttgaaagtcctggttgcc
accgatgttgtcggtcgtggtatcgatatcacaacgatctcgcacatcatcaacttcgat
gtgccgcaggactgcgacgattatgtgcaccgcgttggccgtactgggcgaatgggccgc
gatggcgtggcgtatacgtttatcgttcccggcgaaggggatgtgctgacgtcgatcgaa
cagcggatcaataagcaattgatcaaggacgtgatggatgggtttgaccatcccgtgccg
gtcaatcgcgtcgcgcaagctcaggaggctgaaaagccgaaggagccgggccggccaaag
ttgaaccggatcgtccgtcacacgcggaagcgattctag
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