Rosistilla carotiformis: Poly24_54620
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Entry
Poly24_54620 CDS
T09894
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rcf
Rosistilla carotiformis
Pathway
rcf03420
Nucleotide excision repair
rcf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Poly24_54620 (pcrA_2)
03430 Mismatch repair
Poly24_54620 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcf03400
]
Poly24_54620 (pcrA_2)
Enzymes [BR:
rcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Poly24_54620 (pcrA_2)
DNA repair and recombination proteins [BR:
rcf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Poly24_54620 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Poly24_54620 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_16
AAA_12
eIF3_p135
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDV71723
UniProt:
A0A518K1N7
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All DBs
Position
7302667..7304982
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AA seq
771 aa
AA seq
DB search
MDLILDNLTDPQRAAVTHMDGPMLMLAGPGSGKTRVVTHRIAHLLREGVPASQILALTFT
NKAAEEMLARVQQLAPGEPVWMSTFHRFCARMLRQYSSLVGLQENYSIYDMADAKATMKR
AIEVSGISLSHTSPDQIANAISHFKNQLLTPESMEGANLPAGKMLAAKVYPYYQQLLLVA
NAVDFDCMLLHVARMLRENPELREALDSRFRYIMVDEYQDTNLAQYAIVRSLSVVHQNLA
VTGDPDQSIYGWRGANLNNILDFENDYPQVKTVRLEQNYRSTPNILRVADQLITNNTRRK
HKGLYTHNPEGAAVRLRIYANGYQEADDIADQIVEQIQNHGRSPKDFAILCRMNYLTRSL
EHSLRSRVVPYTIVRGVEFYQRKEIKDLLSYLQLINNPANDAALSRIVNTPARGIGKTTM
DRVMLYAARHRIPLFEAICRCDEIESIKPRTRGLLKRFVGIIDALSRKASSSLEDLLRFV
LEQTQYSDYLRFSTVEGEDNDALANVDELVSAAVEFDRQHPDDGSLETFLEQVALISDTD
AWEESSDRVTLMTLHAAKGLEFPCVYIIGVEDQVLPHHRSHDDPMQFEEERRLLFVGITR
AEQTLQLSMAKLRSARGSMRPAAASPFLLELPREEMQVIDAHQPTQYGDDNDFDVDVEYP
EAWDMHADHDDDLNQLPPEERTPETTSTPRTAPLASVTTAAQMLEQQMANTIDPDIYTVG
MIVSHPEYGSGRIQSLSGSASKRTATVNFFVDSIERRFRLSHAQLTIESED
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggacttaattctcgacaacttgaccgacccgcagcgggccgcggtcacgcacatggat
ggtccgatgttgatgctcgctggccccggcagcggcaagacccgcgtggtcacccatcgg
atcgcacatctgttgcgggaaggagtccccgcgtcgcagatcctggcgttgaccttcacc
aacaaagcggcggaggagatgttggcccgcgtccaacaactcgctcccggcgaaccggtt
tggatgagtacgttccaccgcttttgcgctcggatgctgcgacaatattcgtccctggtc
ggcctgcaagagaactattcgatctacgacatggccgacgccaaggcgacgatgaagcgg
gcgatcgaagtctcggggatctcgttgagtcacacgtcgcccgatcagatcgccaacgcg
atcagccactttaagaatcaattgctgacgcccgagtcgatggaaggggcgaatctgccg
gcgggcaaaatgctcgccgccaaggtctatccttattaccaacagttgctgttggtcgcc
aacgccgtcgatttcgattgcatgctgctgcacgtcgcccggatgttgcgcgagaacccc
gagttgcgggaagccttggattcgcggttccgctacatcatggtcgacgaataccaggac
accaacctagctcaatatgcgatcgtccgttcgctgtcggtcgtccaccagaacctggcg
gtgacgggggatcccgatcaatcgatctacggttggcgtggagcgaatctgaacaacatc
ctcgacttcgaaaacgattacccgcaagtcaaaaccgttcggctcgaacagaactaccgc
agcacgcccaacatcttgcgcgtagccgatcaattgatcaccaacaacacccgccgcaag
cacaagggtttgtacacgcacaatcccgaaggagcggcggtgcggttgcggatctacgcc
aacgggtatcaggaagcggacgacatcgccgaccagatcgtcgaacagatccagaaccac
ggccgcagcccgaaggactttgcgatcctgtgccggatgaattatctgacccgttcgttg
gaacattcgctccgctcccgcgtcgtcccctacacgatcgttcggggcgtcgagttctat
cagcggaaagagatcaaggatctgctctcttatctgcaactgatcaacaacccagccaac
gacgccgcgctgtcgcgaatcgtcaacacgccggctcgcgggatcggcaagacgacgatg
gaccgagtgatgttatacgccgctcggcaccggattccactgttcgaagcgatctgccgc
tgcgatgaaattgaatcgatcaaaccgcgaacccgtgggctgttgaaacgttttgtcgga
atcatcgacgcgctcagccgcaaggcttcgtccagcctcgaggatctgttgcggttcgtc
ttggaacagacccagtacagcgattacctgcggttttcgacagtcgaaggggaggacaac
gatgcgcttgccaacgtcgacgaattggtttccgccgccgtcgaattcgatcgccagcat
cccgacgatggatcgctggaaacctttctggaacaggtggcgttgatctccgacaccgat
gcctgggaagaatcgagcgatcgcgtgacgctgatgaccctgcacgccgccaaggggctc
gaattcccttgcgtctacatcatcggcgtcgaggatcaagtgctgccgcaccatcgcagc
cacgatgatccgatgcagtttgaagaggagcggcggttgctgttcgtggggatcacgcgc
gccgaacagacgctgcagttgagcatggccaagctgcgatcggctcgcggtagcatgcgt
cccgccgcggccagcccattcctgttggaactgcctcgcgaagagatgcaggtgatcgat
gcccatcaaccgacgcaatacggcgacgacaacgatttcgatgtcgacgtcgaatatccc
gaggcatgggatatgcatgccgatcacgacgacgatctgaatcaattgccgcccgaagaa
cggacgccggaaaccacatccaccccgcgaacggctccgctggcgtcggtcaccaccgcg
gctcagatgctcgaacagcagatggccaacacgatcgatccggacatctatacggtgggg
atgatcgtcagccatcccgaatatggcagcggccggatccagagtctttcgggttcagca
agcaaacggacggcaacggtcaacttctttgtcgacagcatcgaacgccgcttccgactc
tcccacgctcaactgacgatcgaaagcgaagattga
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