Rosistilla carotiformis: Poly24_55470
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Entry
Poly24_55470 CDS
T09894
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
rcf
Rosistilla carotiformis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
PP-binding
AMP-binding_C
Thioesterase
Abhydrolase_6
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
QDV71807
UniProt:
A0A518K208
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All DBs
Position
7405358..7411339
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AA seq
1993 aa
AA seq
DB search
MHPTRTLRDSESLGNAVVPTPALGTLSSCCARLSPVEYDQLVDLWNRTEHRWDDAPCLHE
LFTTQSKHTPDAIAVIHGDLRLTYAELEERSRRVACRLIELGVSPGDRVAVVADGTPNAY
IGLLGILRAGAAYLPIDPTFPADRIRFFFEDAAVRFVVGNIDPARFEDHPGLTFVQCDEL
PTGNIDCLPSVAPTNLAYVLFTSGSTGKPKGVMLNHQGPVNTVRDINLSFDVQATDRVLA
LSALGFDLSVYDLFGMFAAGAAIVLPTPEQSRDPHSWRRLIEQHQVTIWNTVPALMDMFV
TSLDASTTLPSLRRVMLSGDWIPVSLPDRIRHAAPKAHLYSLGGSTEASIWTVLYPIDRV
DPDWRSIPYGKPLRNQRCYVVDAERKLCKIGEVGELCLAGVGVALGYVNRPELTQERFIP
DPFSPGDTLYLTGDLCRYGEDGNLEFLGRQDHQVKIRGYRIGLGEIDAETQKLPAVRDAV
VVASEEEAGARLIAYVVFESGQQLTLEELQTQLAASLPKYMLPAAMVPLDRLPLTANGKI
DRKGLPSPTATREASPKQQPSNPTEAAVCEILSELLHRDPIDPRDGFIALGGNSLVAVAL
ASRLKTVFGIQIPYWDILANSPNAIRLASRIETHRQSPQPVASTLVEIGSTPLDEAPLSY
QQQQIWVEHFLKSNRARYNIPLVYDLVGEVDLSALQQAFTLLIDRHAILRTLYTPTSSGL
TQRPIEPTQFTVESVDLGQIDSATRQQTIDAQTLAFVSEGFDLDHQIPIRAAHFKLSPNQ
SRMVVSVHHIAFDGHSIDLLHRDLASFYRAIVDRKGPTLAALPYQYANYALAQQTADGSD
LLDADRAYWQRQLSGELPQLDLPRDPSDAAESEGDTISLQIDRDLLDAARRYSSNRQSTL
FVTLLAAIKATLFRYTGQQDLIVGSAVAARPEAEMEDLIGYFINVLPLRTQFAASESFDA
LQTKVRETTLSAMAHQNYPLELMKREIFASQGTGTSPFRVLFVLENEPCSLELTGVEARR
VPMETQTAKFDLLIAASESDASLRIDLQYRCQNFCRERIVHFGEHLTTLLSAAVEAPATP
VDRLQMLPASQRASLLQGPIGSSASTGDPNATEQCDDSDRRLSPSVLTLFDAQVERSPDS
TAVCFEEQTFSYAELDRRATILASRLIELGVLPDLPVALSITRSPEMVVAVLAVLKAGGC
YVPVDPALPRHRRKQILDDCQPQVLLTLTGLTNDLELNESATPTLRLDTFDFSNHPASTI
ELPALSADNLAYILYTSGSTGKPKGVAMPHGAVANLIAWQLENSQADPTTKTLQFASLGF
DVSFQEIFATLCSGGQLELVSEDRQQDLHRLWKFIVDAKIGRIFVPFVVLRTLCEIAGDS
AREASLREVITAGEQLQITPAVRKFFQQQPGCRLWNHYGPTETHVATGYRLAADPSTWPA
IPPIGKPIDRCVALVLDEHMQPLPQGIEGELYLGGACVARGYYQNPSLTQQRFVSGPLAT
PACDRMYRTGDICRLNWDGELEFVRRNDDQIKLRGHRVELSEIETVLNQHADVKQAVVCF
DPSSLGGHLIAYVLSDSEEIRVDDLKQFLQSRLPAYMLPNVFCIVDDFPKTASGKIDRKR
LPKVSPSVEASERQATEASTPNDPLIARLLEIWRSVLDTDQIDAHSNFFDCGGDSLAAAL
LFARMESEFGQALSITKLVECPTVTKLAELYRQDDDRVEGCWNEVMRIDPQQSASTAAPL
FCLPGIDGHLLNFRDLAAAIGQDRPVYGLQPYGLDGNSSPCTSIEEIASRHVQEIRRVMP
NGPYHLAGFSFGGVVAYEISQQLRRAGEQVTLAILDAYTGLPKLAPLYQRFAFHLRFARQ
CDGCQRWKYLAERVTGLVAAIQHRFGWITMEQRLERIINAKGNYAKVAAMNMTALDEYRP
TAAQGPATLYRAKFRADWPGQDATDPNMGWGNVFDTDDLDVIEVEGAHANMLSEAKLAGL
VEHLRRTMSRDDV
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atgcacccaactcgaaccctgagggattccgagtcgcttggcaatgcggttgttccaacg
ccagctctgggtaccttgtcgtcgtgttgtgcgcgtttgtcgccagtcgaatatgaccaa
ctggtcgacttgtggaatcggaccgaacaccgctgggacgatgcgccttgcctgcacgag
ctgttcacgacccaaagcaagcacacccccgatgccatcgcagtgatccatggcgatctt
cgattgacctatgccgaattggaagaacgctcgcgacgggtcgcctgtcggttgatcgaa
ttgggagtctctccaggtgatcgggtcgcggtggtcgccgacgggacacccaacgcctac
atcggtttgcttggcatcctacgtgctggcgcagcctaccttccgatcgatcccacgttt
cccgccgaccgcatccgcttctttttcgaagacgccgcggtccggttcgtcgtgggaaat
atcgatcctgcaagattcgaagaccatcccgggctgacgttcgtccagtgcgatgaactg
cccaccggcaatatcgattgtttgcccagcgtcgcgccaaccaacctcgcctatgttctg
tttacctccggttctacaggcaagccgaagggagtcatgctcaatcaccagggaccggtg
aatactgttcgcgacatcaacttgagcttcgatgtgcaagcaaccgatcgcgtcttggcg
ttgtcggcccttggcttcgatctgtcggtctatgatctgtttggaatgtttgccgccggc
gcggcgattgttctaccgacccccgaacaatcgcgtgatccccacagctggcgcaggttg
atcgaacaacatcaggtcacgatctggaacacggtcccggctttgatggatatgttcgtc
acgagcttagacgcgtcgaccactttgcccagcctgcgccgcgtgatgctcagcggcgac
tggattcccgtctcgctgcccgaccgcatacgccacgcagcccccaaagcgcatctgtat
tcgttgggcggcagcaccgaggcatcgatctggacggttctatacccgatcgatcgcgtc
gatcccgattggcggagcattccctatggcaaaccgctccgcaaccaacgctgctatgtc
gtcgatgccgaacgaaagttgtgcaagatcggcgaggtgggtgaattgtgtctggcaggc
gttggtgtcgctctaggctacgtgaatcgacccgaattgacacaagaacgcttcattccg
gatcccttctctcccggagacactctttatttaaccggcgacctgtgtcgttacggtgaa
gatggaaaccttgaatttctggggcggcaagatcatcaagtcaagatccgcggctaccga
atcggcctcggcgagatcgatgccgaaacgcaaaagctgcccgccgttcgcgatgcggtc
gtcgtcgccagcgaagaagaggccggtgcgcgattgatcgcgtatgtggtctttgaatcg
ggacaacagctgacgctcgaggaattgcagacccagctggcggcaagtcttccaaaatat
atgctgcccgccgccatggtcccgctagatcgattgccgctgaccgccaatggcaagatc
gatcgcaagggtttgccctccccgacggcgacgcgagaagcgagcccgaagcagcagccc
agcaatcccaccgaagcggccgtctgcgagatcttatccgaactgttgcatcgcgatccg
atcgatccgcgcgatggcttcatcgcgctgggtggaaattctttggtcgccgtggcgttg
gccagtcggctcaaaaccgttttcggaatccagatcccgtactgggatatcctggccaat
tctcccaacgcgatccgactggcatcgcggatcgagacgcatcgccaatcgccgcagcca
gtggccagcacgctcgtcgaaatcggcagcacgcctctcgatgaagctccgttgtcgtac
caacagcagcagatctgggtcgaacatttcctgaaatcgaaccgcgctcgatacaacatc
cccctcgtgtacgaccttgtgggagaggtcgatctgtcggcgcttcaacaagcgttcacc
ttgttgatcgatcgccacgcgatcctgcgaacgctctatacaccaaccagctccggttta
acgcagcggccgatcgagccgacgcagtttacggtggagtcggtcgatctgggacagatc
gattcggcgacgcggcaacaaacgatcgatgcgcaaacgctggcctttgtttcggaaggc
tttgacctcgaccatcaaatcccgatccgtgcggctcattttaaattgagccccaaccaa
tcgcggatggtcgtgtcggtacatcacatcgcgttcgatggccattcgatcgatctgttg
catcgcgatctggccagcttctatcgagcgatcgtcgatcgaaaaggcccaacgctcgcc
gcgttgccctaccaatacgccaactacgcgttggcgcagcagacagcggacggttccgat
ctgttggatgccgaccgcgcgtactggcaacgtcaattgtcgggagaattgccacaactg
gatctgccccgcgacccttccgacgccgcggagtccgagggggatacgatctcgttgcag
atcgatcgcgatttgctggacgcggcgagaaggtattcttccaatcgccaatcgaccctc
ttcgtgacgctgttggctgcgatcaaggcgacgctgtttcggtatacggggcaacaggat
ctgatcgtcggatcggcagtcgcggcgcgacccgaggcggagatggaggatctgatcgga
tatttcatcaacgtgcttccgttgcgaactcagtttgccgccagcgaatcgtttgatgcg
ttgcaaacgaaggtccgtgaaacgaccctctcggcgatggcgcatcagaactatccgttg
gagttgatgaagcgagagatcttcgcgtcgcagggaaccggcacgtcgccattccgcgtc
ttgtttgtcctcgaaaatgaaccctgttctctggagctgacgggtgtcgaagcgcgtcgg
gttccgatggagacgcagaccgcgaagttcgatctgttgatcgctgccagcgaatcggac
gcgagcctgcgaatcgatctgcagtaccgctgccaaaacttctgccgcgaacggatcgtt
catttcggagaacatctgacgacgttgctctccgccgcggtcgaagcacccgcaacgcca
gtcgatcgattgcagatgcttccggcatcgcaacgtgcttccctgctgcaaggcccgatc
ggcagcagcgcttcgacgggcgatccaaacgcgaccgaacaatgcgatgattcggatcgt
cggctttcgccttcggtgctgacgttgttcgatgcccaagtcgaacgaagccccgacagc
acggctgtctgttttgaagagcaaacgttctcctatgcggaactcgatcgccgcgcgacg
atcttggcatcgcggttgatcgaactgggagtgcttcccgatctaccggtcgcgctcagt
atcacgcggtcgccagagatggtggtcgcggttttggcggtcctgaaggccggcgggtgt
tacgttccggtcgatcccgcgctgccacggcaccgccgcaaacagatcctcgacgattgc
caaccgcaggtcttgctgacgctgacgggattgaccaacgatttggaacttaacgaatcg
gcgacgccaactctgcggctggataccttcgatttttccaaccatccggccagcaccatc
gaattgcccgctctgtcggctgataatttggcgtacatcctgtatacctccggatcgacg
ggcaagcccaaaggcgtagcgatgcctcacggtgcggtcgccaatctgatcgcatggcag
ttggaaaactcgcaggccgatccaacgaccaagacgctgcagtttgcgtcgttgggattt
gatgtctcctttcaagagatctttgcgacgctgtgcagcggtggtcagttggaactggta
agcgaagatcggcaacaagacctgcaccgattgtggaagttcatcgtcgacgcgaagatt
ggtcgaatcttcgttccatttgttgtgctgcgaacgctttgtgaaatcgcgggggattcg
gcgcgagaggcgtcgcttcgcgaggtgatcacagcgggagaacagttgcaaatcacgccg
gcggtgcgcaagttcttccaacagcaacccggctgccgactttggaatcactacgggccg
accgaaacccacgtcgcgaccggttatcgtttggcggcggatccgagcacgtggcctgcg
attccgccgatcggcaaaccgatcgatcgttgcgttgccctggttctcgacgaacacatg
caaccgctacctcagggaatcgaaggcgaactgtatctcggcggcgcctgcgtcgcacgc
ggctactatcagaatccctcgctgacacagcagcgttttgtgagcggtccgttggcaacc
cccgcgtgcgatcggatgtatcgaaccggagacatctgtcgactcaactgggatggcgaa
cttgaattcgtccgccgcaatgacgatcagatcaaactgcgcggccaccgcgttgaactg
agcgagatcgagacggtgctcaaccagcacgccgacgtgaagcaagccgttgtttgtttc
gaccccagcagcctgggcggtcatttgatcgcgtatgtgttgtccgattcggaagagatc
cgcgtcgatgacctgaagcaatttttacagtcgcggttgccagcgtacatgctgcccaat
gtgttttgcatcgtcgatgattttcccaaaaccgccagtggaaagatcgaccgcaaacgt
ttgcccaaggtctcgccatcggttgaggcttcggaaaggcaagcgacggaagcttcgaca
cccaacgatcctctgatcgctcgtctgttggagatctggcgatcggtattggacaccgac
cagatcgacgcccacagcaacttcttcgattgcggtggagactccctcgcggcggccctt
ctgttcgcgcggatggaaagcgaatttggtcaggcgttgtcgatcacgaaactcgtggaa
tgtcctaccgtcacaaagctggcggaactgtatcgtcaggacgacgatcgggtcgagggc
tgctggaacgaagtcatgcggatcgatccgcagcaatccgcgtcgacggcggctccgctc
ttctgtctgcccggaatcgacggccatctactcaacttccgcgatttggcggccgccatc
gggcaggatcgtcccgtatatgggctgcagccctacggcctcgatggcaatagttccccc
tgcacaagtatcgaagagatcgccagccgacacgttcaagagatccgtcgtgtgatgcca
aacggaccgtatcatctggcgggattttcgtttggcggagtcgtcgcgtatgagatctct
caacaattgcgtcgtgccggcgaacaggtgacccttgcgattctcgatgcttataccgga
ctgcccaaactggcgccgttgtatcaacgcttcgcattccatctgcgttttgcgcggcaa
tgcgacgggtgtcaacgttggaaataccttgccgaacgcgtgaccggtttggtcgccgcg
atccagcatcgtttcggttggatcacgatggaacagcggttggaacgaatcatcaacgcc
aaaggaaactacgcaaaagttgccgccatgaatatgacggcgttggatgagtatcgccct
acggccgcccaagggccggcgacactctaccgtgccaagttccgcgccgattggcctggc
caggacgctaccgatcccaacatgggatggggcaacgtcttcgacaccgatgacttggac
gtgatcgaagtcgaaggagcgcacgccaacatgctttccgaagccaaactggccggccta
gtcgaacatctccgccgcaccatgtcgcgcgacgacgtttga
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