Reichenbachiella carrageenanivorans: N7E81_03345
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Entry
N7E81_03345 CDS
T09654
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rcg
Reichenbachiella carrageenanivorans
Pathway
rcg03410
Base excision repair
rcg03430
Mismatch repair
rcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N7E81_03345 (recJ)
03430 Mismatch repair
N7E81_03345 (recJ)
03440 Homologous recombination
N7E81_03345 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rcg03400
]
N7E81_03345 (recJ)
DNA repair and recombination proteins [BR:
rcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N7E81_03345 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N7E81_03345 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N7E81_03345 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
UXX80135
UniProt:
A0ABY6D8D5
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All DBs
Position
869830..871521
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AA seq
563 aa
AA seq
DB search
MIKEWILKPQPEADQIKRLQNQLHLHEALCALLIQRDIKNIEEAKAFFRPELTSLHDPFL
MKGMDIAVERLTQAIVNEEKILIYGDYDVDGTTSVALVYNFLMELSPNVFTYIPDRYTEG
YGVSRKGIQWAIDHNVNLLITLDCGIRAVENIQFATNHNINVIICDHHLPGDVLPSAIAI
LDPKQSDCTYPYDELSGCGIGYKLLEAFSIQNGIDHNKLLNLLDLVAVSIASDIVPVTGE
NRLLAWFGMKKLNNSPLPGFAALIEKAGMRTPLSISDVVFGIGPRINAAGRIGHAKTALD
LLTQPTKEDAYVFAEKLNLENQERRNYDESITTTALEMIKEDGQVEKNSTVLYKKDWHKG
VIGIVASRCIEHYYKPTIIMTESNGQITGSARSVNGFDIYQALDKCRGHLIQFGGHKYAA
GLTMTPEKLNDFKIAFEHSVSELIEEKQKTPILDIDLEIDLEDIDFKLFSVLKQMGPFGP
KNMQPTFCSRNVILKKEARVLKEKHLKLFVSQAGTTNNFDAIGFGMGHFHNQLDTPFDIV
YTLEENHYMGQTTLQLMLKDIRV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggaatggatattaaaacctcagccagaagcagatcaaattaaaagacttcaa
aatcaacttcatctccatgaagctctttgtgcattattgatacagagagatattaaaaac
atagaagaggctaaggctttctttaggccagagctaactagtctacacgatccctttcta
atgaaaggtatggacatcgcagtagaacgactgacccaagccatcgttaatgaagagaag
atactgatctatggcgactatgatgtagatggcacaactagtgtcgcattggtttacaac
ttcctaatggaactatcaccaaatgtctttacatatatccctgatcgatatacggaaggg
tatggtgtttcccgaaaaggaatacaatgggctatagaccataacgtcaacttactgatt
acattagactgcggcatacgtgcggtggaaaatattcaattcgccactaatcataatatc
aacgttattatctgcgatcaccatttgcctggggacgtgctcccttctgccattgcgata
ctcgaccctaagcaatctgattgtacttacccttacgatgaattgtctggctgtggcatc
ggttacaaactgcttgaggccttttctattcaaaatggcatagaccataataaactgctc
aacttactcgatttggtagctgtgagtatagcatcagacatagtgcctgtaactggagaa
aatagactgcttgcttggtttgggatgaagaaactcaacaactctcctctgcctggcttt
gctgcacttatagaaaaagcaggtatgcgaacacctctaagtatctctgacgtggtgttt
ggtataggccctcgaattaatgctgcgggaagaataggtcatgcaaagaccgcccttgat
ctgctgactcagcctactaaagaggacgcttatgtatttgctgaaaagcttaacttagaa
aatcaagaacgtcgcaactatgacgagagcattaccactaccgctctggaaatgatcaaa
gaagatgggcaagtagaaaagaacagtactgtactatataagaaagactggcataaagga
gtaatagggattgttgcctcgcgatgcatcgagcattattataaacctactattataatg
actgaatcgaatggacaaatcactgggtctgctcggtctgtaaacggatttgacatctat
caagcacttgacaagtgtaggggacatttgatccaatttggcggacataagtatgcagct
ggattaactatgactccagagaaattgaatgacttcaaaatagcatttgaacattccgtt
tccgagctgatcgaagaaaaacaaaaaacaccaatactagacattgacttagagatcgat
ttggaggacatagatttcaagttgtttagtgttttaaaacaaatgggaccctttggtcct
aaaaacatgcagcctaccttttgtagcagaaatgtaattctcaaaaaagaggcacgagta
ttgaaagagaagcaccttaagctctttgtctcacaagctggcacgaccaacaattttgat
gcaatcggttttggtatggggcattttcacaatcaattggatacaccgtttgacattgtg
tatactttagaagaaaatcactacatgggacaaaccactttgcaacttatgctaaaggat
atcagggtgtga
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