KEGG   Reichenbachiella carrageenanivorans: N7E81_03970
Entry
N7E81_03970       CDS       T09654                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rcg  Reichenbachiella carrageenanivorans
Pathway
rcg03030  DNA replication
rcg03410  Base excision repair
rcg03420  Nucleotide excision repair
rcg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rcg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    N7E81_03970 (polA)
   03410 Base excision repair
    N7E81_03970 (polA)
   03420 Nucleotide excision repair
    N7E81_03970 (polA)
   03440 Homologous recombination
    N7E81_03970 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rcg03032]
    N7E81_03970 (polA)
   03400 DNA repair and recombination proteins [BR:rcg03400]
    N7E81_03970 (polA)
Enzymes [BR:rcg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     N7E81_03970 (polA)
DNA replication proteins [BR:rcg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     N7E81_03970 (polA)
DNA repair and recombination proteins [BR:rcg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     N7E81_03970 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     N7E81_03970 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_5 HHH_2 RNase_H_2 Pro-kuma_activ HHH
Other DBs
NCBI-ProteinID: UXX80256
LinkDB
Position
complement(1010752..1013568)
AA seq 938 aa
MSKPEKKLFLLDAFALIYRAHFAFSKNPRINSKGMNTSAVFGFVNSLLEILKKEKPTHIG
VAFDTSAPTFRHVQFPEYKAHREETPEDIRTATPIIKDILKAFNIPILQMDGFEADDVIG
TLAKAAARKGFEVFMMTPDKDYAQLVEEHIYLYKPAYMGNGVDVLGVSEVLAKFEIENVD
QVRDILGLEGDAADNIPGIPGVGKKTAIKFLQAYGTIEGLLENTADLKGKMKEKVEEFGQ
QGILSKELATIKLDVPIAFEEEDLVHCEPNEAKVRELFDELEFRTMLKRIFDTVEAPAPT
ATTKTVAKKPAAAPSQLGLFGDPQADSEAAIIVVEKKNAKSHKHEYHCVDTPELRKSLVK
YLSLQEEYCFDTETTSINPEEAELVGIAFAYVAGEAYYVPFPADQKEAQAIAEEFRSVLE
NDSIRKVGQNLKYDIQVMKNYGIEVKGKMFDTMLAHYLIDPESRHKMDVLAENYLNYTAI
PIEDLIGKGKAQKNMRDIAVTQVVAYAAEDADITLQLKHKLAAEIEEKGLGKLLHEVEEP
LSIVLADVEYAGVKIDTDVLGVMSKELNDLSAIAQEKIFELAGQEFNINSPKQMGEVLFD
KMQLIEKPKKTKTGQYATGEEILSKLAPEHEIAERILEFREYQKLKSTYVDALPLLISQK
DGLIHTDYRQAVAATGRLSSNNPNLQNIPIRTAKGREIRKAFVPRGNDYTIFAADYSQIE
LRIIAAFAKDESMIQAFKDGQDIHATTASKVFDVPMAEMTTDIRRKAKEVNFGLIYGISA
FGLSQNIGISRTEAAEIIDSYFTQFPNIKRYMDDQVNFAKEHEYVETLLGRRRYLRDINS
RNATVRGFAERNAVNAPIQGSAADIIKVAMINIHDWMKKEKLKSKMIMQVHDELVFDAHK
DELDLLKIKVEELMKNALPIDVPMEVGMGTGTNWLEAH
NT seq 2817 nt   +upstreamnt  +downstreamnt
atgagtaaacctgagaagaaattattcctgctagatgcctttgccctgatctatcgcgcc
cattttgcgtttagcaaaaacccaagaatcaactcgaaaggcatgaatactagtgccgtt
tttgggtttgtcaattctttattagaaatactcaaaaaagaaaagccaacacatatcggt
gtggcgttcgataccagtgcgcctacttttagacatgttcaatttccagagtataaagca
cacagggaagaaaccccagaagacattcgtacagccactccgatcatcaaagacattttg
aaagcctttaatatccctatcctacagatggatggatttgaggcggatgacgtgatcggt
accttggcaaaagcagcagcacgcaaaggctttgaggtatttatgatgacgccagacaag
gactatgctcagctggtggaggaacatatatacctctacaaacccgcttatatgggtaat
ggtgtagatgtgttgggtgtctccgaagtattggccaagttcgaaatcgaaaatgtagat
caagtccgtgatatcttggggctagaaggcgatgcggccgataacatcccgggcatacct
ggggtgggtaagaagacggccatcaagtttttgcaagcctatggcacgatagaaggtctg
cttgaaaacaccgccgacctgaaaggcaagatgaaagaaaaggtggaggaatttggtcaa
cagggcatcttgtctaaagagctagcgaccatcaaattggatgtgcccattgcatttgaa
gaagaagatttggtgcattgcgaacccaatgaggccaaggtcagagaactattcgacgag
ttggagtttagaaccatgctcaagcgaatcttcgacaccgtagaagcaccagcacctacg
gccactaccaagacagtagcaaagaagcccgcagcggcaccatctcagctcggtcttttt
ggcgaccctcaagcggacagtgaggccgccatcatagtagtagaaaagaaaaatgccaaa
agccacaagcatgagtaccattgtgtagacacgcctgagcttagaaaatcactggtaaaa
tacctttctctccaagaggaatactgttttgataccgaaaccacgagcatcaaccctgaa
gaagcagaactagtcggaatcgcttttgcttacgtagcgggcgaggcatattatgtgcca
ttcccagcggatcagaaggaggcgcaagccatcgccgaggaatttcgatctgtattagaa
aacgacagcatcagaaaagtaggccagaacctgaagtacgatattcaggtcatgaaaaac
tacgggatagaagtgaaaggcaaaatgtttgacaccatgcttgcgcattatttgatagac
ccagagtcgaggcacaaaatggatgtactcgccgaaaactatctgaattatacggctata
cccatagaagacctgataggcaagggtaaggcacaaaagaatatgcgtgatatcgctgtg
actcaggtggtcgcctatgctgctgaggatgccgatatcacactccagctcaaacataaa
ctggcagcagaaattgaagaaaaaggacttggaaaattgcttcatgaagtagaggaaccg
ctcagtattgtgctagctgatgtagagtacgcaggtgtgaaaatcgatacggacgtactc
ggcgtgatgtccaaagagctcaacgacctgagtgcaattgcacaagaaaaaatatttgaa
ttggctggtcaagagttcaacatcaattcgccaaagcaaatgggcgaagtgctgtttgat
aaaatgcagctgatagaaaagcctaagaagactaaaacaggacaatatgctacgggtgaa
gaaatcctatcgaagttggcacctgaacatgagatcgccgagcgcatcttagaatttaga
gaatatcaaaaactgaagtcgacctatgtggacgctttacccttgctgattagccaaaaa
gatgggctgattcataccgactatcgtcaagcagtagcagccacaggtcggttaagctcc
aacaatcccaacctgcaaaacattccgatccgaacggctaaggggcgagagattcgaaag
gcatttgtgccgagaggcaatgactacacgatttttgcggcggattattcgcaaatcgag
ttgcggatcattgcggctttcgccaaagacgaaagtatgatacaggccttcaaggacggg
caagacattcacgctaccacagcgtctaaggtgtttgatgtgccgatggcagagatgacg
acagatattcgccgcaaggccaaggaggtcaactttgggttgatctatggtatttcggct
ttcgggttgtcgcaaaatattgggatttctcggactgaggctgcggagattatcgattcg
tatttcacgcagttcccgaatatcaagcgatacatggatgaccaggtcaattttgccaaa
gaacacgagtatgtggagacgctcttggggcgtcgccgctacctacgagacatcaattct
cgcaatgcgaccgtccgtggatttgcagagcgaaatgccgtgaatgctcccatacagggt
agtgcggcggacatcatcaaagtagcgatgatcaacatccacgattggatgaaaaaggaa
aaactaaagtccaaaatgatcatgcaggttcatgatgaattggttttcgatgcgcacaag
gatgaactggatttgcttaaaatcaaagtggaagaattgatgaaaaacgcactgcctatt
gatgtgcctatggaagtaggtatggggactggcaccaactggctagaggcgcattga

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