Reichenbachiella carrageenanivorans: N7E81_15910
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Entry
N7E81_15910 CDS
T09654
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rcg
Reichenbachiella carrageenanivorans
Brite
KEGG Orthology (KO) [BR:
rcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rcg03032
]
N7E81_15910 (topA)
03400 DNA repair and recombination proteins [BR:
rcg03400
]
N7E81_15910 (topA)
Enzymes [BR:
rcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N7E81_15910 (topA)
DNA replication proteins [BR:
rcg03032
]
Prokaryotic type
DNA Topoisomerases
N7E81_15910 (topA)
DNA repair and recombination proteins [BR:
rcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N7E81_15910 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
UXX78842
LinkDB
All DBs
Position
3915609..3918014
Genome browser
AA seq
801 aa
AA seq
DB search
MSKNLVIVESPAKAKTIEGYLGKDYKVASSYGHVRDLQKGNNAIDIANGFTPTYEVSKDK
KEVIRDLKKLAKAADTIYLASDDDREGEAISWHLQETLKLEESKTKRIVFHEITKNAISK
AINNPRALNVDLVNAQQARRVLDRLVGFELSPILWKKIKTGLSAGRVQSVAVRLVVDRER
EIDAHQAVSAFKVTAEFSLDKGKILSAELPAKFKTKEEAETFVNDCVGASYDIKNLEKKP
GKKTPAPPFTTSTIQQEASRKLGFSVARTMSVAQKLYEAGKISYMRTDSLNLSDEAIAGA
KNEITSSYGEHFVKTRKYKTKNASAQEAHEAIRPTNFSDRSAGSDDSERRLYELIWKRAI
ASQMADAEIEKTVATIGISTRKEHLTATGEVVKFEGFLTVYTESTDDDTEEEENKGMLPP
LEIGQDLDLNIMKAKEGFTRHAARYTEASLVKKMEEMGIGRPSTYAPTISTIQRREYVVK
EARDGHERKYAEITLQNDKVVSSEKTEITGAEKNKLFPTNIAMIVNDFLVDYFPNVIDYS
FTANVEKEFDEIAHGLKNWNAMIESFYGGFHKTVEETEQVERSEIGKVRELGDDPATGKP
IIARMGRFGAMVQMGETSEDEEAEKPKYASLRKGQFLDNITLEDALELFKLPRQVGELED
KVMTAAIGRFGPYIRHDGKFVSIPKDMDPLQITADEAVELIMAKRKSDAEKFIKGFDENP
DVQVLNGRWGPYIKFEKKNVKIPKDKEPTELTYAECVDLAEKTPDKKGRGATAKKKAPAK
TTAKATKPKATKPKTTKAKKK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaatctggtaatagtagagtcgcccgccaaggcgaaaacgatcgaggggtat
ttgggtaaagactacaaagtagcatctagctacggccacgtccgagacttacaaaaaggc
aataacgccatcgacatagcaaacgggtttacccctacttatgaagtatctaaagacaaa
aaggaagtcattagagacttaaaaaaattagccaaagccgccgacactatctatctagca
agtgatgatgaccgcgaaggagaagccatctcttggcacttacaagagactttgaaattg
gaggaatccaaaaccaagcgaattgtatttcatgaaattactaaaaatgcaatcagcaag
gccatcaataatcctcgtgcactcaatgtagatttagtgaatgcgcaacaagccagacgc
gtactggatcgtttggtcggatttgagctttctcctattctttggaaaaagataaaaaca
ggtttgtctgcaggacgggttcagtctgtagccgtacggctggtcgtagacagagagcga
gaaattgatgcgcatcaggccgtatccgcattcaaggtcactgcagaattctctttagat
aaaggtaaaatactcagtgccgaactgcctgctaaattcaaaacaaaagaagaagccgaa
acatttgtaaatgactgtgtaggtgcttcgtacgacattaaaaatttggagaaaaagcca
ggaaaaaaaacacctgcacctccatttaccacctctaccatacagcaggaggccagtaga
aaattaggattttctgtagctcgtaccatgagcgtagctcagaaactatacgaagctggt
aaaatctcctatatgagaactgattcattgaacctatctgacgaagctatagcaggtgct
aaaaatgaaattactagcagctacggtgagcatttcgtaaaaacccgaaaatacaaaacc
aaaaatgcctcagcacaagaagctcacgaagccattcggccaaccaacttctctgaccga
tctgctggtagcgacgacagtgaaagaaggctttatgaactgatctggaaacgcgccatt
gcctcacaaatggcggatgctgaaatagaaaaaacagtagctaccataggcatatctact
cgaaaagaacaccttacagccactggtgaagtggtgaagtttgaaggtttcttgaccgta
tataccgaatctacagacgacgataccgaggaagaagaaaacaaaggcatgttgcctcct
ttggaaatcggacaagatctggatttgaatatcatgaaggctaaagaaggctttacacgt
catgcagccagatatactgaggcaagcttggtgaagaaaatggaagagatgggcatcgga
aggccgtctacatatgctccaactatctccaccattcaacgacgtgaatacgttgtcaaa
gaagcaagagatgggcacgaaagaaaatacgccgaaattactttacaaaatgacaaagta
gtgtcaagtgaaaaaactgaaatcactggcgcagaaaagaacaaactcttccctaccaac
attgccatgattgtcaatgactttttggtagactacttccctaatgtgatcgattactct
tttacggccaacgtagaaaaggaatttgacgaaatcgctcatgggctgaaaaattggaat
gcgatgatcgaatcgttttatggaggatttcacaaaacggtagaagagactgagcaagta
gaaagatctgaaataggtaaagtacgtgagctaggtgatgatcctgccacaggaaaacct
attatcgctcgcatgggcagatttggtgccatggtacaaatgggagaaaccagcgaagat
gaagaagctgaaaaacctaaatatgctagcctaagaaaaggacagtttttagacaacatc
actttggaagatgctttggagttattcaaacttcctcgtcaagtaggtgaattagaagac
aaagtcatgacagcagccatcggtaggtttggtccatatatccgtcacgatggcaaattt
gtgtctatccccaaggatatggatccattgcagatcaccgctgatgaagcggttgaattg
atcatggcaaaaagaaaatctgatgccgagaaattcatcaaaggttttgacgaaaaccct
gatgtacaagtacttaatggcagatgggggccatatatcaagtttgaaaagaaaaatgta
aaaatccctaaggacaaagaaccaacagagctgacctatgccgaatgtgtagatctggct
gagaaaactccagataaaaaaggccgtggagcaacagctaagaaaaaagcccccgctaaa
actaccgccaaagcaacaaaaccgaaagctacaaaacccaaaacaactaaggctaagaaa
aagtaa
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