Ruminococcus champanellensis: RUM_00190
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Entry
RUM_00190 CDS
T02600
Name
(GenBank) hypothetical protein
Organism
rch
Ruminococcus champanellensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cthe_2159
Dockerin_1
DUF3540
Motif
Other DBs
NCBI-ProteinID:
CBL16300
UniProt:
D4L9K5
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All DBs
Position
13236..16316
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AA seq
1026 aa
AA seq
DB search
MKSGKANRRRMLAGMLALSVLCTSGVIRTGASVSAAATVAGDVNLDGTVDAKDVTALQQY
LIRKATLTATAAENGDLNGDGVLNSVDLALLKRQVLASTPQAEATYIHLKDTSIEVEGDH
ATLSNSNKTVTIDASGTYYIDGTLTDGQIIVNVPDIVADAETVKLFLNGVNITGVSAAPI
LIENAENTSLNLVAGTTNYVYDGATYAENTAAIYAKDDMTIKGEGALVVTASTQYGIHCN
NDLKITGGDITVITENTTTKMDGIRAKQSVRIKDGTVKVNATGDGIKSTKADVNISGGNV
SVKAGNDAIQAETTIDISAGTLLACGDRGLTSITATNITGGSVCATATDSQAALVRASQG
CMLLTYAAEWTKGNEIAVKSGATTVYAATPNKKFDYVLLSSPDLTTSAAYSLYTGGQQMK
HSADATGVFQMSADASFTGVEALNGSGTVTTEAGVQLNGSSLTVSGEGVELTSSTIATIT
QPGIYNVTGSMTGGQIVVNVDKTTYADAIVELVLDGIELTNTADSPIYVASVGDECRITA
KNGTTSTISDGTNYTNADSDSGAIYSKDDLKIKGKGTLIVNGNYQDGIVSKDDLKIWNGS
VTVNAVDDCLRGKDSVRIGDPDDTDYSALDLKLTSTSGDGIKSSGTDTGKGYVTITGGTV
DITSKSGDGIQAEQTFTMNGGNVTINTYQGHGYTGSGSSGGGGGWGGGMQDGNNNKVDLS
VKGIKAVGLYDTDGTTYLSGGDLIINGGTLNIDSTDDSLHCGGNMSINGGNITLASADDG
MHSDHNLTIGESTTGGYDAPWINVTYSYEGVEGLTIVQNCGTVMVTSKDDAYNAAGGADS
SGMGGGWGGGWGGGSVGGGSYSMTFNGGYTFVSAAGDGLDSNGEMIFNGGYVFVSQTGGG
NGPLDCGDGYSITYNGGTVIAAGSSSMFEYPSNKAFLSTTSVSAGSTITFTNASGTVIAT
FTLPNASQEMVLCSTESNVSCYTGGTLSGVTYFGSQDGTNRCGYGGTISGGTSVSESGGG
GNRPWG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgggaaagcaaacaggcgcagaatgcttgccggtatgctggcgttgagcgtt
ctgtgtaccagcggtgtgattcgcaccggcgcatccgtcagtgcagcagccacggttgca
ggcgatgtaaacttggacggcactgtggacgcaaaggatgtgaccgctttgcagcagtat
ctgatccggaaagcgaccctcactgcaacggcagcagaaaacggggatctcaacggagac
ggtgtgctgaacagcgtagatcttgcattgctcaagcgtcaggtgctggcttccaccccg
caggctgaggctacatatatccacctgaaggacacttccattgaagtagagggggatcac
gctacgctgagtaacagtaataaaacggtgaccattgacgcatccggtacttattatatt
gacggtactctgacggatggacagatcatagtcaatgtaccggatattgtggcggatgct
gaaaccgtcaagctgtttctcaacggcgtgaacatcaccggcgtttccgctgccccgatc
ctgattgagaatgcggaaaacacctctttgaacctggttgcaggtaccaccaattatgtg
tacgacggcgccacctatgcagaaaataccgcagccatttatgccaaggatgacatgacc
atcaagggagagggtgcactggttgtgaccgcatccacccagtatggcatccactgcaac
aacgatctcaaaatcaccggcggtgatattactgtcattacggaaaataccaccaccaag
atggacggtatccgggcaaagcagagtgtgcgcatcaaggatggtacggtgaaggtcaac
gccaccggagacggcatcaaatctaccaaggcggatgtgaatatctccggcggcaatgta
agcgtcaaggcagggaatgatgctattcaggcggaaaccaccattgacatttctgccggt
accctgctggcatgtggcgaccggggtctgaccagcattaccgctacgaatattaccggc
ggttctgtttgtgcaaccgccacagacagccaggctgcgcttgtgcgtgcatcccagggc
tgcatgctgctgacctatgcggctgagtggacaaagggcaatgagattgcagtcaagtcc
ggtgctacaaccgtttatgcagcaacccccaacaagaagtttgactatgtgctgctgagc
agtccggatctgacaacctccgccgcatacagcctgtataccggcggtcagcagatgaag
cacagtgcggacgccaccggcgtgttccagatgagcgctgacgcatccttcactggggta
gaggcactgaacggctccgggactgttaccacggaagcaggcgtccagctgaatggctcc
agtctgacagtatccggcgagggcgtggagctgaccagcagcaccattgcaaccatcacc
cagcctggtatttataatgtaaccggttccatgaccggcgggcagatcgtggtgaacgtg
gataagacaacctatgcggacgccattgtagagctggtgctggacggcatagagctgacc
aatacggcggattctcctatttatgttgcaagcgttggagacgagtgccggatcactgcc
aagaacggtaccaccagtaccatttctgatggtaccaactataccaatgcggacagcgat
agcggtgctatttattccaaggatgatctgaagatcaaaggcaagggcacgctgatcgtc
aacggcaattaccaggacggcattgtcagcaaggatgatctgaagatctggaatggttct
gtgaccgtcaatgcagtggatgactgcctgcgggggaaggattccgttcggatcggtgat
ccggatgatacggattattccgcactggatctgaagctgacatccacctccggcgacggc
attaagtcctccggcacggataccggcaagggctatgtgaccattaccggcggcacagtg
gatatcacatccaagagtggagacggcatccaggcagagcagacctttaccatgaacggt
ggtaacgtgaccatcaatacctaccagggtcacggctacactggttccggctcctccggc
ggtggcggcggctggggcggcggtatgcaggacggcaacaacaataaggttgacttgagc
gtcaagggcatcaaggcagtgggtctgtatgatacggacggcaccacatatctgagcggc
ggtgatctgatcatcaacggcggcacgctgaacattgattccacagacgactccctgcat
tgcggcggcaatatgtccatcaacgggggcaatatcaccctggcttctgcggatgacggc
atgcattccgaccataacctgaccatcggggaaagcaccaccggcggctatgatgcaccc
tggatcaacgtcacctattcctatgagggagttgagggtcttacaattgtgcagaattgc
ggcaccgtcatggtaacctccaaggatgacgcctacaatgcagcaggcggtgcagactcc
agcggcatgggcggcggctggggcggcggctggggcggcggcagcgtcggcggcggcagc
tacagcatgaccttcaacggtggctatacctttgtcagtgcagcaggggacggactggac
tccaacggagagatgattttcaatggcggttatgtattcgtttcccagactggcggcggc
aacggccctctggactgcggcgacggctattccatcacctacaacggcggcactgtgatt
gctgcgggcagcagtagtatgtttgaatatccttccaacaaggcgttcctgtctactaca
tccgtttcggctggttctaccatcacctttaccaatgcaagtggtacggtgatcgcaacc
tttacgctgccgaatgcatcccaggaaatggtgctctgctccacagagagcaacgtaagc
tgctacaccggtggtaccctcagcggcgttacctactttggcagccaggacggcaccaac
cgctgcggttacgggggaaccatttccggcggtacctctgtcagcgaatccggcggcggc
ggaaatcgtccctggggctga
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integrated database retrieval system
