Ruminococcus champanellensis: RUM_00310
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Entry
RUM_00310 CDS
T02600
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00260
Glycine, serine and threonine metabolism
rch00460
Cyanoamino acid metabolism
rch00630
Glyoxylate and dicarboxylate metabolism
rch00670
One carbon pool by folate
rch00680
Methane metabolism
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
rch01120
Microbial metabolism in diverse environments
rch01200
Carbon metabolism
rch01230
Biosynthesis of amino acids
rch01240
Biosynthesis of cofactors
rch04981
Folate transport and metabolism
Module
rch_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RUM_00310
09102 Energy metabolism
00680 Methane metabolism
RUM_00310
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RUM_00310
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RUM_00310
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RUM_00310
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RUM_00310
Enzymes [BR:
rch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RUM_00310
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Gene cluster
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CBL16309
UniProt:
D4L9L4
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All DBs
Position
33715..34968
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AA seq
417 aa
AA seq
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MYETMMDTIGFVEKYDAEVGEAMNKELVRQRRNLELIASENIVSPAVMAAMGSVLTNKYA
EGYSGKRYYGGCECVDIVEDIAIERAKKLFGAKFANVQAHSGAQANTAVYFALLNPGDTV
LGMNLAHGGHLTHGSPVNLSGKYFNFIPYGLGDDERIDYDKVEALAKEHQPKLIVAGASA
YPRVIDFARLSEIAKSVGAYLMVDMAHIAGLVAAKQHPSPVGYADVVTSTTHKTLRGPRG
GLILTNDEELAKKINKAVFPGIQGGPLMHVIAAKAVCFGEALKPEFTEYQKQVVANAQAL
ANGLVKRGFNLVSGGTDNHLMLVDLRPFDITGKELEHRLDEVYITVNKNAIPNDPQSPFV
TSGVRIGTPAVTSRGLGVTEMEQIAEFIYLAAKDFDANADAIRAGVGEICKQYPLYE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaaccatgatggacaccatcggctttgttgaaaagtatgatgctgaggtcggc
gaagcaatgaacaaggagctggttcgccagcgcagaaacctggagctgattgccagtgag
aacattgtttctcctgcagttatggcagcaatgggctcggttctgaccaataagtatgca
gagggctactccggcaagcgttactacggcggctgcgagtgcgtggatattgttgaggat
attgccattgagcgggcaaagaagctgttcggtgcaaagtttgccaatgtacaggcacat
tccggcgcacaggcgaataccgcagtgtactttgctctgctgaatccgggggatacggtt
ctgggcatgaacctggcgcacggcggtcatctgacccatggttctccggtgaacctgtcc
ggcaagtacttcaatttcattccctacggtctgggcgatgacgagcgtatcgactacgac
aaggtagaggcactggcaaaggagcatcagcccaagcttatcgtagcaggcgcaagcgca
taccccagagtgatcgattttgcacggctgtccgaaattgccaagtccgtcggcgcatat
ctgatggtggatatggcgcacattgcaggtctggttgcggcaaagcagcacccttctccg
gtgggctatgcggacgtggtgacctccaccacccacaagaccctgagaggaccccgtggt
ggtctgatcctcaccaatgatgaggaactggcaaagaagatcaacaaggcggtattcccc
ggtatccagggcggcccgctgatgcatgtgatcgcagcaaaggcagtttgcttcggcgaa
gccctcaagccggagtttaccgagtatcagaagcaagtggttgccaatgcacaggcgctg
gcaaacggtctggtaaagcggggcttcaacctggtatccggcggtacggacaatcacctg
atgctggttgacctgcgccccttcgatatcaccggcaaggagctggagcatcgcctggat
gaggtttacatcaccgtcaacaagaatgccatccccaacgatccccagagtcccttcgtg
accagcggcgtgcgcatcggtactccggcagtgaccagccgtggtctgggcgtcaccgag
atggagcagatcgcagagttcatctacctggctgccaaggattttgacgccaatgcggat
gcgatccgtgcaggcgtgggcgagatctgcaagcagtatccgttgtacgaataa
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