Ruminococcus champanellensis: RUM_00580
Help
Entry
RUM_00580 CDS
T02600
Name
(GenBank) DNA primase, catalytic core
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RUM_00580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rch03032
]
RUM_00580
Enzymes [BR:
rch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
RUM_00580
DNA replication proteins [BR:
rch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RUM_00580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
Toprim_2
Toprim_4
Toprim
Toprim_3
DnaB_bind
DnaB
DUF3854
Motif
Other DBs
NCBI-ProteinID:
CBL16335
UniProt:
D4L9P0
LinkDB
All DBs
Position
complement(59598..61343)
Genome browser
AA seq
581 aa
AA seq
DB search
MPLPDEFIYQLKLANPIDTTMGRYVHLIRSGSNYKCLCPFHSEKTPSCTVYTGTQSFYCF
GCGAGGDVITFTKQIENLDTYEAIKLLAERGGLEMPENDLNKDGAKLKLRILEMNREAAN
FFYRNLLQGQDKRGLQYAVQRGLTPKAIKKYAIGYAPAAWDGLMKHLEGLGFTREEMLSA
GLIRQNARGCFDFFRERVMFPIIDLRGNVIAFGGRLIEGEGPKYLNSGDTPVFKKSRNLF
SLNFAKNANVKQLILAEGYMDVIAINQAGFEQVVATLGTALTAEQARIMAQYATEVVLCY
DSDSAGQNATHRAINLLSEAGLHTRILKVQDAKDPDEYIRKFGATRFKLLLDNSGGAINF
ELARCREGLDLATEQGKIDFLRRTVQVLAGIRNEMEREVYLSRIAKEEEISLDILHSQVK
AQLRKSYYTEKKQSWNAMMAKSSFRDELNPEAPQYQREAKAEEQILAYLFLHPDLLPEVE
KRLKPEHFFTSLHRKIYEVFCERMPETDTFSVSMFRDACSDAEMGRITGIMAHNAEVALT
ADTLNDCIRLLLQAKEHEKINADQLSDDDLLSIVNQARNKN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgccggacgaatttatctaccagctgaagctggcaaaccccattgacaccacc
atgggtcgctatgtgcatctgattcgcagcggcagcaactataaatgcctttgccccttt
cactcggagaaaaccccatcctgcacagtatacaccggtactcagagcttttactgcttt
ggatgcggcgccggcggagatgtcatcaccttcaccaagcagatcgaaaacctggacacc
tacgaagccatcaagctgctggcggaacggggcggactggaaatgccggaaaacgacctg
aacaaggacggggcgaagctgaaactgcgaatcctggaaatgaaccgggaagccgccaac
ttcttttaccggaatctgctccaggggcaggacaagcgtgggctgcaatacgccgtccag
cgtggactgacccccaaggccatcaagaaatatgccattggctatgcccctgccgcatgg
gacggactgatgaagcatctggaaggtctgggctttacccgggaggagatgctctctgcc
ggactgatccggcaaaacgcccggggctgcttcgactttttccgggagcgtgtcatgttc
cccatcattgacctgcggggcaatgtgatcgccttcggcggcagactcatcgaaggggaa
ggtcccaaatatctgaatagtggcgacacccccgtgttcaaaaaaagccggaatctgttt
tccctgaactttgcaaagaatgcaaacgtgaagcagctgatcctggcagagggctacatg
gacgtaatcgccatcaaccaggctggctttgagcaggtggtcgccaccctgggcacggcg
ctgactgcggaacaagcgcggatcatggcgcagtacgccacagaggtagtgctgtgctat
gacagcgattctgccggacagaatgccacccaccgggcgatcaatctgctcagcgaggca
gggctccacacccggatcctcaaggtgcaggacgcaaaggacccggacgagtacatccgg
aaattcggtgccacccggttcaaactgctgctggataactccggcggtgccatcaacttt
gagcttgcccgatgccgggagggtctggatcttgccacagagcagggcaaaatcgacttc
ctccggcgaacggtgcaggtacttgccggcatccggaacgaaatggaacgggaagtatac
ctgtccagaatcgccaaggaggaggaaatcagcctggacatactccattcccaggtcaag
gcacagctgcgtaaaagctactacaccgaaaaaaagcaaagctggaacgccatgatggca
aaatcctccttccgagatgaactgaacccggaagccccccagtaccagcgggaagcaaaa
gcagaggagcagattctggcgtatctgttcctgcatccggacttgctgccggaggtggaa
aagcgtttaaagccggagcatttcttcaccagtctgcaccggaaaatctatgaggttttc
tgtgaacgcatgccggaaacagacaccttttccgtttccatgttccgggacgcatgctcg
gatgcggaaatgggcagaataacaggaatcatggcacacaatgcagaggtggctctgacg
gcggataccctgaacgactgcatccgtctgctgctccaggcaaaggaacacgaaaaaatc
aatgcagatcaactttctgacgatgatctgctttccatagtcaatcaagccagaaacaaa
aactag
DBGET
integrated database retrieval system
