Ruminococcus champanellensis: RUM_01050
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Entry
RUM_01050 CDS
T02600
Name
(GenBank) Glycosyltransferase
KO
K12996
rhamnosyltransferase [EC:2.4.1.-]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rch01005
]
RUM_01050
Lipopolysaccharide biosynthesis proteins [BR:
rch01005
]
O-antigen repeat unit
RUM_01050
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Gene cluster
GFIT
Motif
Pfam:
DUF1972
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
CBL16375
UniProt:
D4L9T0
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All DBs
Position
complement(118878..120056)
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AA seq
392 aa
AA seq
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MQNIFIVGSKGIPGSYGGYETFVDKLTEYHQDQPEIKYHVACAVDEAEKVGEFTYHNAHC
FNVLRKPIGPAQAIFYDTDALKYCVAYIKQHHISNPIVYVLACRIGPFFNKYVKQIHQLG
GKVYVNPDGHEWMRAKWPAPVRKYWKISEQLMVKHADLLVCDSKNIEKYIRTSYESYKPQ
TTFIAYGAETRKSTLTDADPALTDWYRSKGLAPGEYYLVVGRFVPENNYETMIREFMKSH
TKKHFALITNVSDKFLEDLKRKTGFDRDPRIKFVGTVYNTELLMKIRENAYGYFHGHEVG
GTNPSLLEALGSTRLNLLLDVGFNKEVAEDSALYWNKSDGDLARLIDQADQMLPEEIDRY
DQLSTDRIRQAYSWDYICGRYMDLFLNNCSEM
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatatatttattgttggttcaaaaggcattcccggttcttacgggggatatgaa
acatttgtggataagctgacagagtatcaccaggatcagccggagatcaaatatcacgtg
gcatgcgcagtggacgaggcagaaaaggtgggggaattcacctatcacaacgcccattgc
ttcaatgtgctccgcaagcccatcggccccgcacaggctattttttatgacacggatgcg
ctgaaatactgtgttgcatacataaagcagcaccacatttccaaccccattgtatacgtt
ctggcgtgccgcatcggtccgttcttcaacaaatacgtcaagcagatccatcagcttggc
ggcaaggtatatgtgaacccggacgggcacgaatggatgcgggcaaagtggccggcaccg
gtcagaaagtactggaagatctcggagcagctgatggtcaagcatgcggatctgctggta
tgcgacagcaagaacatcgaaaaatacatccgcacatcctacgaaagctacaagccgcag
accacattcatcgcctatggggcagaaaccagaaagagcaccctgacggatgcagatccg
gcactgacggactggtatcgttccaaagggctggcgccgggcgaatattacctggtggta
ggtcgttttgtgcccgaaaacaactatgagaccatgatccgggaatttatgaagagccac
accaagaagcattttgcgctgattaccaatgtgtccgacaagttcctggaggatctgaaa
cgcaaaaccggctttgacagggatccgagaatcaaattcgttggcaccgtttacaacacc
gagctgctgatgaagatccgggaaaacgcctatggctattttcacggtcacgaggttggc
ggaacgaatcccagtctgctggaggcgctgggcagcacccggctgaatcttctgctggac
gtgggctttaataaggaagtggcggaggattccgccctgtactggaacaaatctgacggt
gatctggcccggctgatcgatcaggctgaccagatgctgccggaggagattgaccgatac
gatcaactgtccactgaccggatccggcaggcttacagctgggattatatctgcggacgg
tatatggatctatttttaaataattgcagtgagatgtaa
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