Ruminococcus champanellensis: RUM_01460
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Entry
RUM_01460 CDS
T02600
Name
(GenBank) Site-specific recombinases, DNA invertase Pin homologs
KO
K06400
site-specific DNA recombinase
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
RUM_01460
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
Motif
Other DBs
NCBI-ProteinID:
CBL16409
UniProt:
D4L9W4
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Position
complement(155685..157553)
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AA seq
622 aa
AA seq
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MIDKTKRLEKEQAKAKTKKRIYVEVDPENYDYFPETRQADYYDNDVPQRVAIYVRVSTDD
VRQTTSFELQKKYYEDFVIKHPHWTLVKIYADEGISGTSLNKREQFLQMISDAKRGKIDM
IITKSVSRFARNIYDFIGIVRDLAERNPPVGVFFESEGIFSLNDDSQLALSFQATMAEEE
SHTRSRSMETSLRMRLDNGIPLTPKLLGYMHDADGTLIPNPDEAPTVKLAFYMYLYGYSS
QQIADAFNALGRKSYLGNINWTSNGIVQILRNERHCGDVLTRKTFTPNFRTHKAKKNRGQ
RPQSRYRNHHPGIVSRDDYIAVQRMLDNAKYGNKSILPEIRVVEDGVLKGFVTINPRWAG
FKEGDYYLASKSVYSSPEEEPHPEEEIQFEVEAGDFDLRGFEIARGEFFDAPRQPHAIIY
HKFIKFSTACVRKFGTQNYIEILINPISRKLAIRPTTKENRNSVMASKPEKGILYPRLIP
TAAFSETMFNLLGWNIEYKYRILGTLYEQDGVVAYIFDTVDSEAYFKPNVLSKENGEEDC
TNVQPLMPSGKRIRAIPESWTSSFGKQFYAQEKSVTELQRQSEEDWMLRLEGQLFETGNK
LHVTGFEELKSFITQELQGVDI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgattgacaaaacgaaacgcttagaaaaagagcaagccaaggcaaagaccaaaaagcgc
atctatgttgaggtcgatcccgaaaactatgattactttcccgagaccaggcaagccgat
tattacgataatgatgtaccgcaaagggtcgccatttatgttcgtgtttctacggacgat
gtccgtcagactacatcttttgagttgcaaaagaagtattatgaggacttcgttatcaag
caccctcactggacgctcgttaaaatctacgctgacgagggcatctccggcacttctctg
aataagcgagagcagtttcttcagatgatttctgacgcaaagcgcggaaaaatcgacatg
attattacaaagagcgtttcccgtttcgcccgcaatatctatgactttatcggcattgta
cgagaccttgccgaacgcaatccgcctgtcggagtcttctttgaaagtgagggaattttc
tcactgaatgatgactcacagcttgcattgtccttccaagccacaatggccgaggaagag
tcacacacacgaagcaggtcgatggaaacttctctacgaatgcgattggacaacggtatc
cctctgactcccaaactgctcgggtatatgcatgatgctgacggaacactgattccgaat
ccagatgaagcacctacggttaaacttgcgttctatatgtatctatacggctattcatca
caacagattgccgatgctttcaatgctctcggacgcaagtcctatttggggaatatcaat
tggacttccaacggtattgttcaaatactacgcaatgaacgacattgcggtgatgtcctc
actcgcaaaacctttacgccaaacttccgtacccataaggcaaagaaaaacagggggcaa
agaccgcagagccgatatcgcaatcatcaccccggcatcgtttcccgcgacgattatatt
gcggttcagagaatgctcgataacgctaagtacggtaacaagtctatcttgcccgaaatc
cgcgtcgtagaagatggtgtcctcaaaggtttcgttaccattaaccctcgttgggcggga
ttcaaagagggggactactacctggcttccaaaagcgtgtattcctctcccgaggaagaa
ccgcatccggaggaagagattcagtttgaggtggaagcaggtgactttgatctgcgcggt
ttcgaaatagcccgcggcgagttctttgatgccccgcgtcagcctcacgccattatttat
cataagtttatcaagttcagtaccgcgtgtgtccggaaattcggcactcagaattatatt
gagattctgataaatcctattagccgaaaacttgcgattcgaccgaccaccaaagaaaac
cgtaatagtgtcatggcgtcaaagccggagaaaggtattctatacccacggttaatccca
accgccgctttcagtgagacgatgttcaaccttcttggttggaacattgaatacaagtac
cgtattttaggtactctctatgagcaggatggcgtagttgcctatatctttgataccgtt
gactcagaggcatatttcaagcctaatgtgctttctaaagagaacggcgaagaggactgt
acaaatgtgcagccgttgatgccctccggaaagcgcattcgtgcaattcccgaatcatgg
acaagctcctttggtaagcagttctatgcgcaggagaagtccgtaacggaacttcagcgg
cagagcgaggaagattggatgctccgtttggagggccaacttttcgagacaggcaacaaa
cttcatgtaacggggtttgaagaactcaaaagttttatcacgcaagaattgcagggcgta
gatatttag
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