Ruminococcus champanellensis: RUM_02600
Help
Entry
RUM_02600 CDS
T02600
Name
(GenBank) pyridoxal-phosphate dependent TrpB-like enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00260
Glycine, serine and threonine metabolism
rch00400
Phenylalanine, tyrosine and tryptophan biosynthesis
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
rch01230
Biosynthesis of amino acids
Module
rch_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RUM_02600
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
RUM_02600
Enzymes [BR:
rch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
RUM_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
CBL16505
UniProt:
D4LA60
LinkDB
All DBs
Position
complement(277348..278709)
Genome browser
AA seq
453 aa
AA seq
DB search
MAKEIPYKIYLDESEMPTAWYNLRADMKNKPAPLLNPATRQPCTAADLAPVFCEELVKQE
LDDTTPYFEIPQEIRDFYKMYRPSPLVRAYCLEKKLGTPAKIYYKFEGNNTSGSHKLNSA
IAQAYYAKQQGLKGVTTETGAGQWGTALSMACSYFDLDCKVYMVKVSYEQKPFRREVMRT
YGASVTPSPSTETAVGRKILEEHPGTTGSLGCAISEAVEKATTTEGYRYVLGSVLNQVLL
HQSVIGLETKAALDKYGVKADIIIGCAGGGSNLGGLIAPFMGEKLRGEADYRIIAVEPAS
CPSLTRGKFAYDFCDTGKVCPLAKMYTLGCDFIPAPNHAGGLRYHGMSSTLSQLYADGLM
EATSVTQTKVFEAAEYFARVEGILPAPESSHAIRVAIDEALKCKETGEEKTIVFGLTGTG
YFDMVAYEKYNDGKMNDYIPTDEELAESLKKLP
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaattccctacaaaatctatctggacgaaagcgagatgcccacagcttgg
tacaacctgcgggcggatatgaagaacaagccggcacccctgctgaatccggccaccaga
cagccctgtacggcggcggatctggcaccggtgttctgcgaggagctggtcaagcaggaa
ctggacgataccaccccctattttgagattccccaggagatccgggacttctacaagatg
taccgtccctcccccctggtacgggcatactgcctggagaagaagctgggcacgccggca
aagatctactacaagtttgagggcaacaacaccagcggcagtcacaagctgaattccgcc
attgcccaggcatactacgcaaagcagcaggggctgaagggcgtgaccaccgagaccggc
gcaggtcagtggggtaccgctctgtccatggcttgctcctactttgatctggactgcaag
gtatatatggtaaaggtttcctacgagcagaagcccttccgccgggaggttatgcgtacc
tacggggcgtccgtgaccccctctccctctacggagaccgcagtgggcagaaagatcctg
gaggagcatccgggcaccacgggaagcctgggctgcgccatttccgaagcagtggagaag
gcgactaccacggagggataccggtatgtgctgggcagtgtgctgaaccaggtgctgctg
catcagtccgtcatcggtctggaaaccaaggcggcgctggataagtacggcgtcaaggcg
gatatcatcatcggctgtgccggcggtggttccaatctgggtggtctgattgcacccttc
atgggcgagaagctccggggcgaggcggattaccggatcattgcggtagagcctgcatcc
tgccccagcctgaccagaggcaagtttgcatacgacttctgcgacacggggaaggtctgc
cccctggcgaagatgtacactctgggctgtgatttcattccggcacccaaccatgcaggc
gggctccggtaccacggcatgagctccaccctgtcccagttgtatgcggacgggctgatg
gaggcaacctccgtgacccagaccaaggtattcgaggcagcggagtatttcgcaagagtg
gagggcatcctgccggcaccggagagcagccacgccatccgggttgccattgacgaggcg
ctcaagtgcaaggagaccggggaggagaagaccattgtgttcggtctgaccggtacgggc
tatttcgatatggtggcatacgaaaagtacaacgatggcaagatgaacgattatattccc
acggatgaggaactggcggagagcctcaaaaagctgccgtaa
DBGET
integrated database retrieval system
