Ruminococcus champanellensis: RUM_02620
Help
Entry
RUM_02620 CDS
T02600
Name
(GenBank) pseudouridine synthase family
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rch03009
]
RUM_02620
Enzymes [BR:
rch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RUM_02620
Ribosome biogenesis [BR:
rch03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RUM_02620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CBL16507
UniProt:
D4LA62
LinkDB
All DBs
Position
complement(281570..282337)
Genome browser
AA seq
255 aa
AA seq
DB search
MRLDKCIADHSAYSRKEVKELLRRGSVRVNGAPEQDPGRQVDPEGDEIMLAGVILPTALH
RTYMLNKPKGCISSTRTGKTKTVVEFLPPELRKGIFPAGRLDVDTEGMLLLTNDGDLAHR
ILSPRRHIPKYYLVQLAKPVVEKTVETFENGVVLEDGTRCLPARVAALPGVENTALVELH
EGKFHQVKRMFAAVENHVEQLLRVQMGGLPIDVKLGKGDYLLLLHKDIERLFKTPDFSEV
LRFCACFFCSYWINE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttgacaaatgtattgcagatcacagcgcctattcccggaaggaggtcaaggag
ctgctgcgccggggcagcgtccgggtcaacggtgcgccggaacaggatccggggcggcag
gtggatccggagggggacgagatcatgctggcaggggtgatcctgcccaccgccctccat
cgcacctacatgctcaacaagcccaagggctgcatttcctccacccgaaccggaaaaacc
aagacggtggtggagttcctgccgccggagctgcggaaggggatcttccctgccgggcgg
ctggatgtggacacggagggcatgctgcttctgaccaacgacggagaccttgcccaccgg
attttatccccccggcggcacatccccaagtattatcttgtgcagcttgccaagccggtt
gttgaaaaaactgttgaaacttttgaaaacggggtggtgctggaggatggtacccggtgc
ctgccggcaagggtggcagcattgccgggcgtggaaaatacggcgctggtggagttacat
gaagggaaatttcaccaggtgaaacgtatgttcgccgctgtggaaaaccatgtggaacaa
ttgctccgggtgcagatgggaggtctgcccatcgacgtaaaattgggaaaaggagactat
ctgttgcttttgcacaaagatatcgagcggctgtttaaaactcccgatttttccgaggtg
ctgcgattttgcgcttgttttttttgttcatattggataaatgagtaa
DBGET
integrated database retrieval system
