Ruminococcus champanellensis: RUM_03050
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Entry
RUM_03050 CDS
T02600
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RUM_03050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rch01007
]
RUM_03050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rch03016
]
RUM_03050
Enzymes [BR:
rch01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
RUM_03050
Amino acid related enzymes [BR:
rch01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
RUM_03050
Transfer RNA biogenesis [BR:
rch03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
RUM_03050
Prokaryotic type
RUM_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
CBL16546
UniProt:
D4LAA1
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All DBs
Position
331425..332705
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AA seq
426 aa
AA seq
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MIDIKLIRTNPELVKENIKKKFQDEKLPLVDEVVELDKQYRETKVKSDALRNQRKTISKA
IGGLMAKGQKEEAEARKAEVAELAKELSESEAMENDLEARIRKIMLVIPNIIDDTVPIGR
DDSENVEVERFGDPFVPEFEVPYHVDIMEKLHGIDIDSARKTSGNGFYYLCGDIARLHSA
ILSYARDFMIDRGFTYFIPPYMIRSDVVTGVMSFAEMEGMMYKIEGEDLYLIGTSEHSMI
GRFIDTILPEESLPQTLTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMIVVCKPEDSKA
WFVKLYQNTVDFFRSLDIPVRTLECCSGDLADLKVKSIDVEAWSPRQKKYFEVGSCSNLG
DAQARRLGIRVKGADGEKYLAHTLNNTVVAPPRMLIAFLENNLNADGSVRIPEPLRMYMG
GKDVIR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatataaagttgatccggacaaatccggaactggtgaaggaaaatatcaagaag
aaattccaggatgaaaagctccccctggtggacgaggttgtggaattggacaagcagtat
cgtgagacgaaagtcaagagcgatgcactgcggaaccagcgaaaaaccatcagcaaggcg
atcggcgggctgatggcaaaaggacagaaggaggaggcggaagccaggaaggcggaggtt
gcggagcttgcaaaggaactgagcgaatctgaggcgatggaaaacgacctggaggcacgg
atccggaagattatgctggtgatccccaacattattgacgatacagtgcccatcggcagg
gatgacagcgaaaatgtggaggtggagcgcttcggggatccctttgtaccggagtttgaa
gtcccctatcatgtggatatcatggaaaagctccacggcatcgacatcgacagtgcccgg
aaaaccagcggaaacggcttctactatctctgcggtgacattgcccggctccattccgcc
attctgtcctatgcccgggacttcatgatcgatcgtggctttacatatttcatcccccct
tacatgatccgcagcgacgtagtcaccggtgttatgagttttgcggagatggagggcatg
atgtacaagatcgaaggggaggatctgtacctgattggtaccagtgagcattccatgatc
ggtcggttcatcgacaccatcctgccggaggagtccctgccccagacgcttaccagctat
tccccctgcttccggaaggaagtgggcgcccacggcattgaggagcgtggcgtataccgg
attcatcagtttgaaaagcaggaaatgatcgtggtctgcaagccggaggacagcaaggcg
tggttcgtcaagctgtaccagaacacagtggacttcttccggagcctggatatcccggta
cgcactctggagtgctgctccggcgacctggcggatctgaaggtcaagagcatcgacgtg
gaggcatggtccccccgtcagaagaagtacttcgaggtaggcagctgctccaatctgggg
gatgctcaggcacggcggctcggcatccgtgtcaagggcgcagacggggaaaagtacctg
gcgcatacgctgaacaatacggtggtcgcaccgccccggatgctcattgcgttcctggag
aacaacctgaatgcggatggttccgtccggattccggagccgctccggatgtatatgggc
ggcaaggatgttattcggtaa
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