Ruminococcus champanellensis: RUM_03150
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Entry
RUM_03150 CDS
T02600
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00051
Fructose and mannose metabolism
rch00541
Biosynthesis of various nucleotide sugars
rch01100
Metabolic pathways
rch01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
RUM_03150
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RUM_03150
Enzymes [BR:
rch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
RUM_03150
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
TrkA_N
NAD_binding_10
adh_short
MATH
Motif
Other DBs
NCBI-ProteinID:
CBL16554
UniProt:
D4LAA9
LinkDB
All DBs
Position
complement(341348..342379)
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AA seq
343 aa
AA seq
DB search
MKNALITGITGQDGSYLAELLLEKGYNVYGIMRRKSVVDYGNVDHIKDKLHFIYADMTDE
ISLINAMRISQADEVYNLAAQSFVATSWEQPLATAEIDAIGVTNMLEAIRTVKPSCRFYQ
ASTSEMFGLVQAVPQCETTPFYPRSPYGVAKLYGHWITKNYRESYGLFACSGILFNHESE
RRGKEFVTRKITDAVARIKQGVLDHVELGNMDAKRDWGHSKDYVRAMWLMLQQDAPDDYV
IATNETRTVREFVEIAFAQAGIQVQWQGTGVDEIGIDKATGKTIVKVNKDFFRPAEVQLL
LGNPAKAEEKLGWKREISFAELVQRMVDNDMALVEKELKVAAL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatgcactgattactggtatcaccggacaggacggttcttatctggcagagctg
ctgctggagaagggctacaacgtatacggcatcatgcgccgcaagagcgtggtggactac
ggcaacgtggatcacatcaaggacaagctgcactttatctatgcggacatgaccgatgag
atctccctgatcaacgcaatgcggatctcccaggcggacgaggtgtacaacctggcggca
cagtcctttgtggcaaccagttgggagcagcccctggcaaccgcagagatcgacgccatc
ggcgtgaccaacatgctggaggctatccgcactgtcaagccctcctgccggttctatcag
gcatccacctctgaaatgttcggactggtacaggcagtgccccagtgcgaaaccactccc
ttctaccccagaagcccctacggggtcgcaaagctgtacggccactggatcaccaagaac
taccgggaaagctacggcctgtttgcatgctccggcattctgttcaaccatgaatccgag
cggagaggcaaggagttcgtgacccggaagatcaccgacgctgtggcacggatcaagcag
ggggttctggatcacgttgagctggggaacatggacgcaaagcgggactggggtcactcc
aaggactatgtacgggcaatgtggctgatgctgcagcaggatgcgccggacgattacgtc
attgccaccaacgagacccgtaccgtgcgggaatttgtagagatcgcctttgcgcaggca
ggcatccaggtacagtggcagggcaccggcgtggacgagatcggcatcgacaaggcaacc
ggcaagaccatcgtcaaggtgaacaaggacttcttccgtccggcggaggtacagctgctg
ctggggaatccggcaaaggcggaggaaaagctgggctggaagcgggagatctcctttgca
gagctggtacagcgcatggtggacaatgacatggcgctggtggaaaaagagctgaaagtg
gctgcactgtaa
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