Ruminococcus champanellensis: RUM_03430
Help
Entry
RUM_03430 CDS
T02600
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch03030
DNA replication
rch03410
Base excision repair
rch03420
Nucleotide excision repair
rch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RUM_03430
03410 Base excision repair
RUM_03430
03420 Nucleotide excision repair
RUM_03430
03440 Homologous recombination
RUM_03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rch03032
]
RUM_03430
03400 DNA repair and recombination proteins [BR:
rch03400
]
RUM_03430
Enzymes [BR:
rch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RUM_03430
DNA replication proteins [BR:
rch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RUM_03430
DNA repair and recombination proteins [BR:
rch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RUM_03430
NER (nucleotide excision repair)
GGR (global genome repair) factors
RUM_03430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_polI_exo1
HHH
Motif
Other DBs
NCBI-ProteinID:
CBL16582
UniProt:
D4LAD7
LinkDB
All DBs
Position
complement(374435..376990)
Genome browser
AA seq
851 aa
AA seq
DB search
MTLLAIDGNSILNRAFYGIRMLTSSKGVPTNALFGFFNIYLKEAAQVQPDGVAVAFDLRS
PTFRHKAVASYKANRKGMPEELAQQLAPVKELLRGMGVTVLEAEGFEADDILGTLARICT
EHGEDCVILTGDRDSLQLVGEHVRVDLATNKETIPYTEERFREEYGFAPVHLIDLKALMG
DSSDNIKGVPGIGPKTATGLIQTYGTIEELYAHLDEAGLTKGAYAKLSGGKASAEESKWL
ASIVKDAPIPQDPAAYRLKEPDKESVSALLTELELFKLLDKLKLEAAPVQSKPEPDAPAI
SLCKVVQPFDRSMLDGLTDREQPVDFLLREDTLYIHTGTCICTTREQGLILAFLASGCKK
RSFDAKPVYRYAFAADSGLTGLCFDGAIAAYLHEATKASYEIPALCRSFHLPYEEDMGDT
ADIAALPGLCDALANKLEAEGLTRLMEEIELPLVEVLASMEHTGVLVDQDGVRRFGDALS
GEIRQLEEEIYTLAGKQFNIASPKQLGQVLFEDLEIPHPQGKKKTKTGSFSTNAEVLEKL
RGAYPIVSLILRYRQLTKLNSTYVAGLLKTVAPDGRIHTCFKQTETRTGRISSTEPNMQN
IPVRTELGKEMRKFFVAPRGRILLDADYSQIELRILANLCEDANMQQAFLSGADIHASTA
AQVFGVPREAVTPQMRSAAKAVNFGIIYGIGAYSLSQDIGVSVREADRYIKRYLENFPRV
EQFMTRIVEDAERTGFVSTLFGRRREVPELKSHNKIQQAAGRRIAMNTPIQGTAADIIKI
AMIRVYRRLAREQLDARLILQVHDELIVEAAVQDADRAAVILREEMEHAWDMAVPLTAEV
GKGESWYAAKG
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgactctgctggcaattgacggcaacagcatcctgaaccgggcgttttacggcatccgt
atgctcacaagcagcaagggtgtgcccaccaacgccctgttcgggtttttcaacatctac
ctgaaggaggcggcacaggtgcagccggatggggtggcggtggcgtttgacctgcggagt
cccaccttccggcataaggcggtggcatcctacaaagccaaccggaagggcatgccggag
gagctggcacagcagcttgccccggtgaaggagctgctgcggggcatgggcgtcaccgtg
ctggaggcagagggctttgaggcggacgacattctgggcacccttgcccggatctgtacg
gagcatggagaggactgcgtgatcctcaccggagaccgggacagcctccaattggtgggg
gagcatgtgcgggtggatcttgccaccaacaaggagaccattccctatacggaggagcga
ttccgggaggagtatgggtttgccccggtgcatctgatcgatctgaaggcgctgatgggg
gacagctccgacaacatcaagggggtaccgggcatcggcccgaaaaccgccacgggactg
atccagacctatggcaccattgaggagttgtacgcccatctggacgaggcagggctgacc
aaaggggcatacgccaagctgtccggggggaaggcatccgcagaggaaagcaagtggctt
gcctccatcgtaaaggatgcccccattccccaggatccggcagcgtaccggctgaaggag
ccggacaaggagagcgtatccgccctgctgacggagctggagctgttcaagctgctggac
aagctgaagctggaggctgccccggtacaaagcaaaccggagccggacgccccggcgatc
tccttgtgcaaagtggtgcagccctttgaccggagcatgctggacggcttgacagaccgg
gaacagccggtggatttcctgctccgggaggataccttatatatccacacgggcacatgc
atctgcaccacccgggaacaggggctgatcctggcgtttctggcatccggctgcaaaaag
cgcagctttgacgcaaagcctgtgtaccggtatgcctttgcggcagacagcggcttgacg
ggactgtgctttgacggcgccattgccgcatacctgcacgaagccaccaaggcatcctac
gagatcccggcgctgtgccgcagcttccacctgccctacgaggaagacatgggggatacg
gcggacattgccgccctgcccgggctgtgcgatgctctggcgaacaagctggaggcggag
gggctgacccggctcatggaggagatcgagctgcccctggtggaggtgcttgcctccatg
gagcataccggggtgctggtagaccaggatggagtgcgccggttcggggatgcgctgtcc
ggagagatccggcagcttgaggaggagatctacaccctggcagggaagcagttcaacatt
gcctcccccaagcagttggggcaggtactgtttgaggatctggagatcccccatccccag
gggaagaaaaaaaccaaaaccggcagcttttccaccaacgcagaggtgctggaaaagctc
cggggcgcataccccatcgtgagtctgatcctccggtaccggcagctaaccaagctgaat
tccacctatgtggcagggctgctgaaaaccgttgccccggacgggcggatccacacctgc
ttcaagcagaccgagacccgtaccggcagaatttcctccacggaaccgaatatgcagaac
attccggtacgcacggagctgggcaaggaaatgcggaagtttttcgtagccccccggggg
cggatcctgctggatgcggactacagccagatcgagctgcggatcctggcaaatctctgt
gaggacgcaaacatgcagcaggcgttcctgagcggtgcggacattcatgcttccacggcg
gcgcaggtgttcggggtgccccgggaggcagtgaccccccagatgcggagcgcagccaag
gcggtgaacttcggcatcatctacggcatcggggcatactccctgtcccaggacatcggg
gtatccgtccgggaggcggatcgctacatcaagcgatatctggagaacttccccagggtg
gagcagtttatgacccgcattgtggaggatgcggaacgcaccggctttgtatccaccctg
ttcggcagacgccgggaggtgccggaattaaagagccacaacaagatccagcaggcggca
ggcaggcgcatcgccatgaacacccccatccagggcacggcggcggacatcatcaagatc
gccatgatccgggtgtaccggcggcttgccagggagcaactggacgcaaggctgatttta
caggtgcacgatgagctgatcgtagaagccgcagtacaggacgctgaccgggcggcggtg
atcctccgggaggagatggagcatgcctgggacatggcagtgcccctgacagcggaggtt
ggaaagggagagagctggtatgccgcaaagggatga
DBGET
integrated database retrieval system
