Ruminococcus champanellensis: RUM_04330
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Entry
RUM_04330 CDS
T02600
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rch03021
]
RUM_04330
03009 Ribosome biogenesis [BR:
rch03009
]
RUM_04330
Transcription machinery [BR:
rch03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
RUM_04330
Ribosome biogenesis [BR:
rch03009
]
Prokaryotic type
rRNA transcription factors
RUM_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
S1
KH_2
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
CBL16666
UniProt:
D4LAM1
LinkDB
All DBs
Position
479226..480287
Genome browser
AA seq
353 aa
AA seq
DB search
MNNDFFAALSLLGAENSVETDLLVEKVKSAMTKAIHRAYPDSGDNVRVDIDPVTKTFDLC
IIKTVVDDEPLDDNEINIDQARLIDPSAVVGGTVECKLDTASLSRNAAQSAKQSIRGDLR
EISRENLLTKFQDKENECITATVSQVEPGRGTVTLIYDKTELYLFRNEQIPGEVLKEGQS
VKVYITGIANKQKKPIIKISRAHRDLVKRLFELEVPEIYDGTVEVMAISREAGARTKIAV
QSHDPNVDAVGACIGPKRSRITAVVNELNGEKIDIINYSDKPEEFIAKALAPAEVLSVTI
TDPENRSCTVVVPNNQLSLAIGNRGQNAKLAAKLTGYKIDIKPEFENPIQGLE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgacttttttgcagcgctttccttgctgggggcggaaaacagcgtggagacc
gatctgctggtggaaaaggtgaagagcgccatgacaaaggccatacaccgggcgtatccg
gacagcggcgacaacgtgcgggtggacattgacccggtgaccaagacctttgatctgtgc
atcatcaagaccgttgtggacgatgaacccctggatgacaacgagatcaacatcgaccag
gcaagactcatcgacccttccgcagtggttggaggcacggtggaatgcaagctggatact
gcatccctgagccggaatgcggcacagtctgccaagcagtccatccggggggatctgaga
gagatcagccgggagaatctgctgaccaagttccaggacaaggagaacgagtgcattacc
gctaccgtatcccaggtggagccgggcaggggcaccgtgaccctgatctatgacaagacg
gagctgtatctgttccggaacgagcagatccccggcgaggtactcaaggaggggcagtcc
gtcaaggtatacatcaccggcattgccaacaagcagaagaagcccatcatcaaaatctcc
cgtgctcaccgggatctggtcaagcggctgtttgagctggaggttccggagatctatgat
ggcactgtggaggtcatggcaatttcccgggaggctggtgcccgtaccaagatcgccgta
cagtcccatgatcccaacgtggacgcagtgggcgcatgcatcggcccgaagcgctccaga
atcacagcagtggtcaacgagctgaacggggagaagatcgacatcatcaactacagcgac
aagccggaggaattcatcgcaaaggcactggctcccgcagaggtgctcagcgtgaccatt
acggatccggaaaaccgcagttgcaccgtggtggtgcccaacaaccagttgtccctcgcc
atcggcaaccggggacagaacgcaaagcttgctgcaaagctcaccggctataagatcgac
atcaagccggagtttgagaaccccattcaggggctggagtaa
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