Ruminococcus champanellensis: RUM_04540
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Entry
RUM_04540 CDS
T02600
Name
(GenBank) Transcriptional regulator
Organism
rch
Ruminococcus champanellensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_7
TetR_C_11
Int_N
HTH_Tnp_1_2
DUF4085
TetR_C_31
HTH_20
Motif
Other DBs
NCBI-ProteinID:
CBL16685
UniProt:
D4LAP0
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Position
complement(498867..499508)
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AA seq
213 aa
AA seq
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MKQEDTTQRIWDKALELFSTQGYDSVSVGEIAKAVGIKAPSLYNHFPSKQAIFDAIVKST
AAQYEADTDKIHIHVQNVQRDIPVFTEITEDALFEKVRQIFEYSLHNDTISRFRRMMTIE
QFRSPELAALYSKRYVERILHYHAGIFRALIATGEIAAEDPDALAMMYVAPVITLIGVCD
RQPEREPECLEMLQSHVRLFFRMVHGGGSQRSV
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggaggatacaacccagagaatttgggataaggctttggaactgttctctacg
cagggatacgattccgtcagcgtaggagaaattgcaaaagcggtgggcatcaaagcgccc
tcgctttataaccacttcccaagtaagcaggctatttttgacgccattgtgaaatccacg
gcggcgcagtatgaagcagataccgataagattcacatccatgtgcagaatgtgcaaagg
gatattccggttttcacggagatcaccgaggatgcactgtttgaaaaggtgcggcaaatc
ttcgagtattctctccacaatgataccatcagccgctttcgccgtatgatgaccattgag
caattccgctcgccggagttggcagcactctactccaaacgatatgtggagcgcatcctg
cactatcacgccggtattttccgtgctctgatcgcaaccggcgaaattgcggcagaagat
ccggatgcacttgccatgatgtatgtagccccggtcattacgctcatcggcgtctgcgac
cgccagccggaaagagaaccggaatgtttggagatgcttcaaagccatgttcgcctcttt
tttcgtatggtgcatggcggcggttcacagaggagcgtgtaa
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integrated database retrieval system
