Ruminococcus champanellensis: RUM_05070
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Entry
RUM_05070 CDS
T02600
Name
(GenBank) Putative virion core protein (lumpy skin disease virus)
Organism
rch
Ruminococcus champanellensis
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Band_7_1
DZR
Zn_Ribbon_1
Zn_ribbon_3
DUF7577
Band_7
Zn_ribbon_15
DZR_2
UPF0547
DUF2116
Motif
Other DBs
NCBI-ProteinID:
CBL16733
UniProt:
D4LAT8
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Position
552356..553507
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AA seq
383 aa
AA seq
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MAILDVIKFGGLASRDWLVYKHPKDSITLGSQLIVGEGQVAIFVKGGAVCDVFTPGTYTL
STNNLPLLQGIINLPFGGKTPFSAEIYYINTVTKLDLAWGTSDPIQLIDPKYHVRLRIRA
FGQVGMKIADYAGFLRELIGSLNASDVVRYTKVLDFYKGILVTKVKSIIADIIIHDQISA
LEIAAQLDGISQRTQQILTPEFGKFGMQLINFFVKSINFPEEDFETINKILEDKAAFDIM
GDSRYATKRSFDVYEGAATNQNGVAGAFAAGGIGLGAGAAIAGNVQPAASVMQAPAPEAA
YCPACHAANKQGAKFCNSCGASMTPPEPKPAGKTCPGCGAAVPDGSKFCTECGMSLQPPV
CACGATLEPGSKFCNQCGRKVGE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccttgacgtaatcaagtttggcggacttgcgtcccgtgactggctggtgtat
aagcatcccaaggacagcattaccctgggctcccaactgatcgtgggagagggtcaggta
gcgattttcgtaaagggcggcgccgtttgcgatgtatttaccccgggcacctataccctc
agcaccaacaacctgccgctgctgcagggcatcatcaaccttccatttggtggcaaaact
cccttctctgcggagatctactacataaataccgtgaccaagctggatcttgcatggggc
acctctgaccccatccagttgattgacccgaagtaccatgtccggctccggatccgtgcc
ttcgggcaggtgggaatgaagatcgccgattatgccggcttcctgcgggagctgatcggt
tccctcaacgcctccgatgtggtgcggtacaccaaggtactggatttctacaagggcatc
ctggtcaccaaggtcaagtccatcattgcggacatcatcatccacgaccagatctccgct
ctggagatcgctgcccaactggatggcatttctcagcgtactcagcagattctgacgccg
gagttcggcaagttcggcatgcagctgatcaacttcttcgtgaagtccatcaacttcccg
gaggaggatttcgagaccatcaacaagatcctggaggataaggcggcgttcgacattatg
ggcgattcccgctacgccaccaagcgctcctttgacgtatacgaaggggctgccaccaac
cagaacggggttgccggtgcgtttgcagccgggggcattggacttggtgccggtgcagcc
attgccggaaacgtgcagcctgcggcttccgtgatgcaggcgcctgccccggaggcagcc
tactgtcctgcatgccacgcagccaacaagcagggtgcgaaattctgcaatagctgcggc
gcatccatgacaccgccggagccaaagcccgcaggaaagacctgccccggatgcggtgca
gccgtgccggatggctccaagttctgtaccgaatgcggcatgtccctgcagccgccggtc
tgtgcctgcggcgcaaccctggagccaggctccaagttctgcaaccagtgcggcagaaag
gtgggtgagtga
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