Ruminococcus champanellensis: RUM_05510
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Entry
RUM_05510 CDS
T02600
Name
(GenBank) diguanylate cyclase (GGDEF) domain
Organism
rch
Ruminococcus champanellensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GGDEF_GdpP
Sre
Herpes_LAMP2
Motif
Other DBs
NCBI-ProteinID:
CBL16771
UniProt:
D4LAX6
LinkDB
All DBs
Position
complement(599235..600941)
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AA seq
568 aa
AA seq
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MAKSRMEFTKNQTEWIVLTLLALLLLLFQLITSRLTRYGGTFAIGETELEYGRLCSIFNV
LQIFTGMLMVINTKRKGWICMSILSILNLIMVISTVFVQQQVNNLPGVAMQALNLIICST
IYFYVRKCDINAARLDEVANTDELTGLPNRRSLLRHVNRRISKGTPFAFVLLDLDNFKSI
NDTAGHEYGDEILQQIAQRWKEQVQNKNAFFARLGGDEFVLITDYNGDLGKLEQMLHEAI
NRAPSDKRTRFSVRDSSFFITASMGISLFPEHADNVSTLMSYADIAMYQAKARGRQGLCM
FRQEMDSALTDNLQIEQMLRDALQENRFFLAFQPQYHISDHSLRGFETLVRMRDAKGNQV
SPGRFIPVAEASALMIQLDQWIMGNALTCMQPVVAQHPDIILSVNVSARNLLHGDFSTYV
QNLLRSTGFPARNLELEVTESLFISSLEHASKILNRLRDIGIRIALDDFGTGYASLSYLN
RLPIDLLKIDKSFIDQINSDTNGNAFVKAIITMGHVLGCEVISEGVESDSQLDVLKGYAC
DLLQGFLWGKPLSFEEAKQLAQKEPIPS
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcagaatggaatttacaaagaatcagacggagtggatcgttctgaccctg
ctggcgctgctgttgctgctgttccagctgattacctcccgccttacacggtacggcgga
acctttgccattggtgaaacggagttagaatacggcaggctttgcagcatcttcaatgtg
ctgcaaatcttcaccggcatgctgatggtcatcaacaccaagcgcaagggctggatctgc
atgtccattctctcgattttgaatctgataatggtaatctccaccgtatttgttcagcag
caggtcaacaatctgcccggagtcgctatgcaggcgctgaatctcatcatttgcagcacc
atttatttttatgtacgcaaatgtgacatcaacgccgccaggctggatgaagtcgccaat
acggacgagctgaccgggctgcccaaccggcgttccctgctgcggcatgtaaacaggcga
atcagcaagggaacgccctttgcctttgtgctgctggacctggacaacttcaaatccatc
aacgacaccgccggtcacgaatacggagatgagatcctacagcagattgcccagcgctgg
aaggagcaggtgcagaataaaaacgccttttttgcccggctgggcggagatgagttcgtg
ctgatcacggactacaacggggatctgggaaagctggagcagatgctccacgaagccatc
aaccgtgcaccctcggataagcgcacccggttctcggtgcgggacagctcctttttcatc
actgccagcatggggatatccctgttcccggagcatgcggacaacgtttccaccttgatg
agctatgcggatattgccatgtaccaggcaaaggcacggggcagacaaggtctgtgcatg
ttccggcaggaaatggactccgcactgaccgacaatctgcaaatagagcagatgctccgg
gatgcattgcaggaaaaccgcttctttctggcgttccagccccagtaccacatttccgat
cacagcctgcggggctttgagacccttgtccggatgcgggatgcaaagggcaatcaggtc
agtccggggcgatttatcccggtggcggaggcaagcgctctgatgattcaattggatcag
tggatcatggggaacgcccttacctgcatgcagcccgttgtggcacagcacccggatata
atcctgtctgtgaatgtttctgcccggaacctgctgcatggagatttctccacctatgtg
cagaatctgctgcgcagcaccggctttccggcaagaaatctggagcttgaggtgacggaa
tccttgttcatctcctctctggagcatgcaagcaagattctgaaccggctgcgtgatatt
gggatccgcatcgctctggacgatttcggcaccggctacgcttccctcagctatctgaac
cggctgcccattgatctgctgaaaatcgacaaatccttcatcgaccagatcaacagcgac
acaaacggcaatgcctttgtcaaggccatcatcactatggggcatgtgctgggctgtgag
gtcatttccgaaggggtggaatccgacagccaactggacgtgctgaagggctacgcctgt
gatctgctccagggctttctgtggggcaaacccctttcctttgaggaggcaaagcaattg
gctcaaaaggagcccattccatcataa
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integrated database retrieval system
