Ruminococcus champanellensis: RUM_05770
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Entry
RUM_05770 CDS
T02600
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00300
Lysine biosynthesis
rch00470
D-Amino acid metabolism
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
rch01120
Microbial metabolism in diverse environments
rch01230
Biosynthesis of amino acids
Module
rch_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RUM_05770
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RUM_05770
Enzymes [BR:
rch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RUM_05770
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CBL16796
UniProt:
D4LB01
LinkDB
All DBs
Position
complement(626754..628013)
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AA seq
419 aa
AA seq
DB search
MKTTFATKEIVERIAAQYPTPFYLYDEKGIRENARKLKQAFAWNKGYREYFAVKATPNPF
ILKILQEEGCGVDCSSLTELMMSEACGFSGSDIMFSSNVTPAEDFKLAKKLGAYINLDDI
THIDFLEQVAGLPETIFCRYNPGGHFEIETHVMDNPGEAKYGFTTQQLIDGFKILMQKGV
KHFGLHAFLASNTVTNAYYPKLARVLFETAVMLKKETGADIRFVNLSGGVGIPYRPEQEP
NDILAIGEGVRQAFEEIMVPAGLGDVAIFTELGRFMLGPYGNLITKAVHEKHIYKEYIGV
DACAANLMRPAIYGAYHHITVLGKENAPCDHKYDVTGGLCENNDKFAVDRMLPKIDMGDY
LAIHDAGAHGFSMGYNYNGKLRSAEILLCEDGSFKLIRRAETPADYFATFDFTGLFPQK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaacgtttgcaaccaaggagatcgtggagcgcatcgccgcccagtaccccacc
cccttctatctgtacgatgaaaagggcatccgggagaacgcacggaagctgaagcaggcg
tttgcctggaacaagggctaccgggaatactttgcagtcaaggcgacccccaatcccttt
attctgaaaattctgcaggaggagggctgcggcgtggactgctcctctctgacggagctg
atgatgagcgaggcatgcggcttttccggcagcgatatcatgttctcctccaatgtgacc
ccggcggaggatttcaagctggcaaagaagctgggcgcatacatcaacctggatgatatc
acccacattgactttctggaacaggttgcaggtctgccggagaccatcttctgccggtac
aatcccggcggacattttgagatcgaaacccatgtcatggacaatccgggggaggcaaag
tacggctttaccacccagcagctgatcgatgggttcaagatcctgatgcagaagggggtc
aagcacttcggtctgcatgccttcctggcaagcaacaccgtcaccaacgcctactacccc
aagctggcacgggtgctgtttgaaactgctgtcatgctcaagaaggagaccggtgcagac
atccgctttgtaaacctgtccggcggcgtgggcatcccctatcggccggaacaggaaccc
aacgacattctcgccatcggcgagggcgtccgccaggcattcgaggagatcatggtaccc
gcagggctgggggatgtagccatctttaccgaactgggcagattcatgcttggcccctac
ggcaatctgatcaccaaggcagtacacgaaaagcacatttacaaggaatacatcggcgtg
gatgcctgcgctgcaaatctgatgcggcctgccatctacggggcataccaccacattacc
gtgctgggcaaggagaatgcaccctgcgaccacaagtatgacgtaaccggcggtctgtgc
gagaacaacgacaagtttgccgttgaccggatgctgcccaagatcgacatgggggattat
cttgccatccacgacgccggggcacacggcttctccatgggctacaactacaacggcaag
ctgcgctctgcggagatcctgctgtgcgaggacggcagcttcaagctgatccgccgggcg
gaaacaccggctgactactttgcgaccttcgatttcaccggtttattcccccaaaaataa
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