Ruminococcus champanellensis: RUM_06240
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Entry
RUM_06240 CDS
T02600
Name
(GenBank) Deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00240
Pyrimidine metabolism
rch01100
Metabolic pathways
rch01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RUM_06240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rch02044
]
RUM_06240
Enzymes [BR:
rch01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
RUM_06240
Secretion system [BR:
rch02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
RUM_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Motif
Other DBs
NCBI-ProteinID:
CBL16840
UniProt:
D4LB45
LinkDB
All DBs
Position
complement(675929..676417)
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AA seq
162 aa
AA seq
DB search
MLRRDKINYYLDIAETVLERSTCIRRKFGAIIVKHDEIISTGYVGAPRGRKNCNDLNYCT
RDKLGVPKGQRYELCRSVHAEQNAILSAARADMIDATLYLACHDARTDQLDGEVEPCSMC
KRLIINAGIKQVIVRQTRDAYKIITVSDWVEQDESLTGSSGY
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgccgtgataaaatcaattattacctggatattgccgaaaccgtactggagcgc
agcacctgcatccgccgcaagttcggtgccattattgtaaagcatgatgagatcatttcc
accggatacgtcggtgcgccccggggcagaaaaaactgcaatgatctgaattactgcacc
cgggacaagctgggcgttcccaagggacagcgatatgagctgtgccggtcggtgcatgca
gagcagaacgccattttatccgccgcccgggcggacatgatcgacgccaccctgtacctt
gcctgtcacgatgcccggacggatcagctggacggggaagtggaaccctgctccatgtgc
aagcggctcatcatcaacgccggcatcaagcaggtgattgtccgtcagacccgggatgcg
tataagatcatcactgtgtccgactgggtggagcaggacgaatccctgaccggcagcagc
gggtattga
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