Ruminococcus champanellensis: RUM_07680
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Entry
RUM_07680 CDS
T02600
Name
(GenBank) sporulation transcriptional regulator SpoIIID
KO
K06283
putative DeoR family transcriptional regulator, stage III sporulation protein D
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rch03000
]
RUM_07680
Transcription factors [BR:
rch03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
RUM_07680
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIID
HTH_28
HTH_23
HTH_10
HTH_psq
HTH_Tnp_ISL3
Sigma70_r4
HTH_DeoR
HTH_7
HTH_11
HTH_50
HTH_Tnp_4
MarR_2
HTH_IclR
BrkDBD
HTH_22
YidB
Motif
Other DBs
NCBI-ProteinID:
CBL16961
UniProt:
D4LBG6
LinkDB
All DBs
Position
complement(835047..835316)
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AA seq
89 aa
AA seq
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MKGQPNDRAIILGEYILEHKATVRAAAKQFGISKSTVHKDVSERLPKIQPQLYPLVKEVL
ELNKQERHIRGGLATKEKYAKLEQQKHKY
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgaagggacagccgaacgaccgggcaattatcctgggcgagtacatcctggaacacaag
gccactgtgcgggccgctgcaaagcaattcggaatttcaaaatcaactgttcataaagat
gtcagcgagcgtcttccgaaaattcagccccagctttacccgcttgtgaaagaagtactg
gagcttaacaaacaggaacgacacatccggggcggattggcaacaaaagagaaatatgca
aagctggaacagcaaaaacataagtattaa
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integrated database retrieval system
