Ruminococcus champanellensis: RUM_08280
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Entry
RUM_08280 CDS
T02600
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RUM_08280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rch03400
]
RUM_08280
Enzymes [BR:
rch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RUM_08280
DNA repair and recombination proteins [BR:
rch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RUM_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CBL17012
UniProt:
D4LBL7
LinkDB
All DBs
Position
complement(899644..900288)
Genome browser
AA seq
214 aa
AA seq
DB search
MYFAYGEREISYLRQKDRRLCEVIDRIGHIDREVDTDLFSSVIHHIIGQQISTKAQATIW
LRMQEALGKVNAETILSAGAPKLQSLGMTFRKAEYITDFAQKVCSGACNLEAVWHMTDAD
AIRALCTLKGIGVWTAEMILLFCMQRPDIFSFDDLAIQRGLRMVYHHRNIDRKLFEKYRR
RFTPYCSVASLYLWAAAGGAIPELRDYKPKNKGA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgcatacggtgaaagagagatttcctacctgcggcaaaaggatcggcggctt
tgcgaggtcattgaccggatcgggcatattgatcgggaggtcgatacggatctgttctcc
tctgtgatccaccacataattggacagcagatctccacaaaggcccaggcgaccatctgg
ctgcggatgcaggaagcgctgggcaaggtgaatgcggaaaccattctctctgccggtgct
ccaaagctgcaatccttgggcatgacgttccgcaaggcagagtatatcacggattttgct
caaaaagtttgcagcggtgcctgcaacctggaggctgtgtggcacatgacggatgcggac
gcaatccgggcgctgtgtaccctcaagggcattggcgtctggacggcggagatgatcctg
ctgttttgcatgcagcgccctgatattttcagcttcgatgacctggcaatccagcgcgga
ttgcgcatggtttatcaccacagaaacattgaccggaagctgtttgaaaaataccgtcgc
cgattcacgccctattgcagtgtcgcaagcttatatttatgggcagcagcaggcggtgct
atcccggaactgcgggattacaagccaaaaaataaaggcgcatag
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