Ruminococcus champanellensis: RUM_08700
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Entry
RUM_08700 CDS
T02600
Name
(GenBank) Fibronectin type III domain.
Organism
rch
Ruminococcus champanellensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Dockerin_1
PKD_4
CARDB
PKD
Big_7
DUF4832
fn3_4
HYDIN_VesB_CFA65-like_Ig
MG4
CopC
Motif
Other DBs
NCBI-ProteinID:
CBL17048
UniProt:
D4LBQ3
LinkDB
All DBs
Position
943580..952102
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AA seq
2840 aa
AA seq
DB search
MSMFFKRSMSALLAATMLTMAAPFDSLAVFAEDLESTVTIGSADVNGDKKVDEKDCALIL
EAIGSTTGTASVTADNAALNVYGDAVIDVRDLMAVKDAINGIKAYVPEEANVSEQVDLNI
SSTTGYAGEKATFAISLADWEMDVAAYEMRLSLDNALTVEEVSCNGDVQYKLDGSTLKLY
GMYSGSPAYRGTLATITVTLPPEAYGDYGVSVVGADFFNSAYQEYAYQATTGGVTVDMET
KPVYLRASELNSKSLQLSWSMPFDGDKVTGYIISRDGEEIGRTEDLFFDDKDLETGKSYL
YSVQAYGTDYLSAPSRTITVTPTAPVIQSISLPDGKNAVGGASTLVTCLMEHGVRAKTYT
LYCTDEEGNRTVISEGEDQSFSELQVRWQLSELKTGTYTLGLTLTDVDGAEVSAETTAQV
DNTPPGEVFGFTVIPGDEQNELTWGIAAELKVVGYRIYRRTATSNYSELAYVEGRSTLKY
VDKDVETGLEYFYIIAAVDKYGMEGTFSAEVSGSAHVDQTMPEITLFLPGSGTVLYSVVT
LNVKAQDNIGVAKITCFLSDDEGETWKELFTANGDSVSYRFDTSAYDEASVQIKAVAYDY
AGNESSGANINIYAIDNKGPEQVTGVNLKASGATTATVAWEDVPDQDLHHFVVRYGVTGS
SGYKTENIYRTLGINLSGLKPGESYTVVVAAVDTYGNQGEFSEPLIFTTPEDTTAPVIAS
IYPTPSYFAKSIPLQVNAKDDFSVASVTVEASTDQKTWKQIAVIENPEPTKNYFNASYTL
DVTGYPEGTLYVRAYAEDLAGNKGTVENAAVYEYMVDRTAPAAMDTLRAVENDSCIELLW
EEADTDVNYYRLYRADGEDGEFRLLYDRIRYLNHFDRQVTTDVQYRYQVTAVDIAGNESE
PSNVVTATLQEDTTAPEIQSISPETGSELSLNDHSIGILASDNLLLSSLTVEYKTDPDAE
TYQTLKSFTDLTDYYLFATVEIPNLLMVDGTTIYIRAQATDRSGNVSEYAYSAYKVNNAV
TAVTKVTVEQTETANTVKWTANESEQTSGYRIFRKIGSGSYDLIATRAVEKNGDGSYAFA
DEDLRTAGSYTYKIVSVNYNGNTSSRVSGSVSVHTKPVPALNCDTAMEQGVAYVFDASGS
KDQGLLNALVIEYGDGAVEKATSPETAKFEHTYQETGVYQVKLTCTNEFGLVSVLTRSVQ
VVERQLLGTVTVQVKTTDGKAASNIGVYMDFGTDAQTKYVADSRGIVTFQAPAGAHDIGV
YGDGYLPQVKNCVVTAGEENAFSFAVVEQYIVSAEFEIKRMTLDEIIAAGIDITQPENQQ
IVQINVDLTYEITTDSGKKTQSMALYVNNRTKTIISSHTTKGDTSVHYEPVFVRYNEKTG
EVSTVAMLSVPVNVSYLKEFFDVQLHIINNADEQFNISDSTVSLNVPKGLTLMESAASCD
SRIVNIPSIPGKSQKTLSWILRGDHKGEYYLSADFSGTLDQFNEKIETTFVSEEAIKVYG
ETAVGITINVPRASRNNKTYFDVQMKNNTDSSVYNVGASVGTIVAQIMEHEKYTLEGKPL
QARIISPQGEMELIDLTESIEELRPGYTLSVVYSIRNIVPGTLFARSTVRLVDATIRSLS
DSNFPVSLRWVDSIKLLEDGDYDGITSNVRVDKDVDLSKEYVIAVVNAAGNWVPSATIEV
TYPDKTTKTFSADSLGRVRFDRPAGGSETVGIRVSADTYKTHEDSDYYLKYRGTDTVMLN
GESSSDYALTKAMYKKAGSWNLLTGYKRLNMGNKVLDFAIECAVAAKDAESCQLLQNGKI
IQEVKPSGSKFSFTGLNVKDFEEMGDGETLTVRVYQPNGAYYDSKINLTILPDPTVVEPS
FEFSGDAFTFGISDSIPFFGGSSVKIPYPPILEHLNICMDENKIRIGINVDLPIVSTDKE
DKAALDKFVEDFEKLKTNLKRSPSDLLHDKSINTGKISLGKAEVKVLGGGYVEGDFSESG
KAILNGYLYIGIEAGVNFDYQTVVWVIPVTAELGLTGKIVAGTTIKFTYDFDHAWQLDAK
VTAQGTFGVEVFGGVGFSSIAAIGVYGGAELDLDMQLYDTSDDSGPRINTLDLTGELGFR
AYVGPFEYKKAWASQTWHLYTNPELANSEQDAAPSYLAPLYDTAAYSVSEETQEVSKWLG
GSKLEPDKVQTLLTNANNGADPQLATDGTNYVLVYLEKDPARSIYDASRLMYAVYTAETG
TWSDPKPVDENETGDYQPALFGNADGIYLAYQEANQAFGADSELTVDAYAASLGVTCAVF
DAEQQSFGAVTTMTVPENSCNSIPTVFEDGGLVYAAWVSNAKGDYFGTEGANTIFYSICT
EGTWSEPAALASDLTAVTGLQIGKLESGVSVACITDGDNVLITADDRTLTLIAADGTQQQ
VVTGCVSAPVFAQPAWSESPLLIWYDTYNLSCTADGKEIAQLFAQGISGLTDAYTLLPDG
VVYTSAGKDGSDLFLIRYDAAQQAWGAPVQLTDTEGYINGAGAAVCGDQLLMTMLRQNVT
ITEDDVQVESTLCALLRSTFSDLSVDKVDYDFTQIQPGSQLPLDVTVTNHGNSTVNSVTI
GVYTKDGTLISTQDVETTLLSGTAQVLAASFQVPEDMSTTEYQVIVSVPDTTDVNEADNA
AAFSIGYTELSLTTDQLITAQGTKLQICVTNESQIPTGGILDLYHYDESQDPVLSLIVEE
LQPGQSTVYTVDVDDSIISEDNRYVMVKLTADEAEYDESDNEELVAVYLSGSLPTVTIGD
VNGDGEITVNDAVMLLDECAARAVGTTTLDEAQRSRGDVNEDGSITLTDAILILNYCAEK
LVDPELTFADFLKNAGGNNE
NT seq
8523 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgttcttcaaacgaagcatgtctgcactgctggcagccaccatgctgaccatg
gcggctccattcgacagcctggcggtctttgcggaggatctggaatccaccgtaaccatc
ggctcggcggatgtcaacggagacaagaaggttgacgagaaggattgtgcgctgatcctg
gaagcgatcggcagcacgaccggaaccgcttcggtcacagcagacaatgcggcattgaac
gtgtacggcgatgcagtcatcgacgtgcgggatctgatggcagtgaaggatgccatcaat
gggataaaggcctatgtgccggaggaggcgaatgtttcagagcaggttgatctgaacatc
agctccacaaccggatacgccggggaaaaggcaacctttgcgatcagcctggcggactgg
gaaatggacgttgccgcctacgaaatgcggctgtctctggacaatgcactgaccgtggag
gaggtgtcctgcaacggagatgtgcagtataagctggacggcagcacactgaagctgtac
ggcatgtacagcggctctcccgcataccggggtaccctggcgaccattacggttacactt
ccgccggaggcttacggggattacggcgtttccgtagtgggtgcagatttcttcaacagc
gcttaccaggagtatgcataccaggctaccaccggcggcgtgaccgtggatatggaaacc
aagccggtttatctgcgggcttcggagctgaactccaagtccctgcagttgagctggagt
atgccctttgacggggacaaggtgaccggctatatcatcagccgggacggagaggagatc
ggccgtacagaggatctgttctttgatgataaggatctggaaaccggcaagagctatctg
tatagcgtgcaggcatacggcacggactatctgtccgccccttcccgcaccattacagtg
actcccactgcaccggtgatccagtccatcagtctgccggacggaaaaaatgcggtgggc
ggagcatccacccttgtgacctgtctgatggagcatggggtacgggcaaagacctacacc
ctgtactgcacggatgaggagggcaaccgtaccgtcatcagcgaaggagaggaccagagc
ttttctgagctacaggtcagatggcagctgtccgagctgaaaaccggcacgtatacgctg
ggactgactctgacggatgtggacggtgctgaagtttctgcggagaccactgcacaggtg
gataacacaccgccgggggaggtgttcggctttaccgtcattcccggggatgagcagaac
gagctgacctggggcattgcagcggagctgaaggttgtgggctatcggatctatcgccgg
actgccaccagcaactacagcgagcttgcttatgtggaaggacgttccacgctgaagtat
gtggacaaggacgtggaaaccggtctggaatacttctatatcattgcagccgttgacaag
tacggcatggagggaaccttctctgcggaggtcagcggatctgcgcatgtggatcagacc
atgccggagatcaccctgttcctgccgggcagcggtaccgtgctttactcggtggtgacg
ctgaatgtcaaggcacaggacaacatcggcgtagcgaagattacctgcttcctgtccgac
gatgagggcgagacctggaaggaactgtttaccgccaacggggacagcgtaagctatcgg
tttgacacaagcgcctatgatgaggcttccgtacagatcaaggcagttgcctatgactac
gccggcaatgaaagcagcggcgccaacatcaatatttacgccattgacaacaagggaccg
gagcaggtgaccggcgtaaatctgaaggcatccggcgcaaccacagctaccgttgcctgg
gaggatgtgcccgaccaggatctgcaccactttgtggtcagatacggtgtgacgggaagc
agcggttacaaaacggagaatatctaccgcaccctgggcattaacctgagcggactcaag
cccggagagagctataccgtagtggttgccgcagtggatacatacggcaaccagggcgaa
ttctccgagcctctgatcttcaccaccccggaggacaccacagcgccggtgatcgcttcg
atctatccgacccccagctattttgcaaagtccattccgctgcaggtaaacgcaaaggat
gacttctctgtagcgtccgtaacggtggaggcttccacggatcagaagacctggaagcag
attgctgtcattgaaaatcccgaacccacgaaaaattacttcaatgcatcctacaccctg
gatgtgaccggctatccggaggggacgctctatgtgcgtgcctacgcagaggatctggca
gggaacaagggtacggtagagaatgctgctgtatatgagtatatggtggatcggactgcc
cctgccgctatggatactctgcgggcagtggagaacgattcctgcatcgagctgctgtgg
gaagaagcagatacagatgtgaattactaccggctgtaccgggcagacggggaggacgga
gaattccggctgctctacgacagaatccggtatctgaatcattttgaccggcaggtgacc
acggatgtgcagtaccggtatcaggtgactgcggtggacattgccggcaacgaaagtgaa
ccctccaatgtggtaactgcaaccctgcaggaggataccaccgcgccggagatccagagc
atcagcccggaaaccggcagtgaactgagcctgaatgaccattccatcggcattctggca
tcggacaacctgctgctgtccagtctgacagtggagtataagacagatccggacgcagaa
acctatcagaccctcaagagcttcacagatctgacggactactatctgtttgcaacggtg
gagatccccaacctgctgatggtggatggtaccaccatttatatccgtgcccaggccacg
gaccggagcggcaatgtgagcgagtatgcatattccgcatacaaggtcaacaatgcagtg
actgcggtgaccaaagtgactgtggagcagacggaaactgccaataccgtcaagtggacg
gcgaatgaatccgagcagaccagcggctatcggatcttccggaagatcggctccggcagc
tatgatctgatcgcaacccgtgcagtggaaaagaacggagacggcagctatgcatttgcc
gatgaggatctgcgcactgccggaagctatacatataaaattgtttccgtcaactacaac
ggcaacacctcctcccgtgtcagcggttctgtatccgtacataccaagccggttccggca
ctgaactgtgacactgctatggagcagggcgttgcatatgtgtttgacgccagcggcagt
aaggatcagggactgctcaacgctctggtgatcgaatacggggacggcgcagtggaaaag
gcgacttctccggaaactgcaaagtttgagcatacttaccaggaaaccggcgtgtaccag
gtgaaactgacctgtaccaatgagttcggactggtcagcgttctgacccgttccgttcag
gtagtggagcgtcagctgctggggactgtcaccgttcaggtcaagaccactgacggcaag
gcagcttccaacattggcgtatacatggacttcggcaccgatgcccagaccaagtatgtg
gcagacagccggggcatcgtgaccttccaggcacctgccggcgcccacgatatcggcgta
tacggggacggctatctgccccaggtgaagaactgcgtcgtgactgccggagaggagaat
gccttctcctttgcagtggtggagcagtacatcgtttctgcggagtttgagatcaagcgt
atgaccctggatgagatcattgccgcaggcatcgatattacccagccggaaaaccagcag
atcgtacagatcaatgtggatctgacctatgagatcaccacggacagcggcaagaagacc
cagtccatggcgctctacgtaaacaaccggaccaaaaccatcatttcctcccataccacc
aagggagacaccagtgtccattacgaaccggtgtttgtacggtataatgagaagaccgga
gaggtcagcaccgttgcaatgctgagtgtgccggtgaatgtaagctatctgaaggaattc
ttcgatgtgcagctgcatatcatcaacaacgcagatgagcagttcaatatttccgacagc
accgtgagcctgaatgtgcccaaggggctgacgctgatggagtctgccgcaagctgcgac
agccgcattgtgaacatccccagcattcccggcaagagccagaagacgctgtcctggatt
ctccggggcgatcacaagggtgagtattacctgtccgcagatttcagcggcaccctggat
cagttcaacgagaagatcgagactacatttgtcagcgaggaagcgatcaaggtttatggc
gaaaccgctgtagggatcaccatcaatgtgcccagagcttccagaaacaacaagacctat
ttcgatgtgcagatgaagaacaacacggacagctccgtatacaacgtgggtgcttccgtg
ggtaccattgttgcacagatcatggagcatgaaaagtacaccctggagggcaagccttta
caggctcggatcatttctccgcagggcgaaatggaactgatcgatctgacggaatccatt
gaggagctgcgcccgggttacaccctcagcgttgtgtactcaatccgtaatatcgtaccg
ggtacattgtttgctcgttctacggtgcgcctggtggatgccaccatccgttctctttcc
gacagcaatttccctgtatccctgcgctgggtggacagtatcaagctgttggaagacggc
gactatgacggcattacctccaatgtccgtgtggacaaggatgtggacttgtccaaggaa
tatgtgatcgcagtggtcaatgcagcaggaaactgggtacccagtgcaacgattgaagta
acctatccggacaagaccaccaagaccttttctgcggattccttgggacgggtcagattc
gatcggccggcaggcggctctgaaacagtgggcatccgggtttccgccgatacctataag
acccatgaagacagtgattattatctgaagtaccggggcacggatactgtgatgctcaac
ggagaatccagcagtgattatgccctgaccaaagcaatgtataaaaaggctggttcctgg
aacctgctgaccggctataagcgcctgaatatgggcaacaaggttctggattttgccatt
gagtgcgctgtggctgcaaaggacgccgaaagctgccagctgctccagaacggtaagatc
attcaggaagtgaagcccagcggcagcaagtttagctttaccggcttgaatgtcaaggat
ttcgaggaaatgggagatggagagacgctgactgtccgggtataccagcccaacggcgca
tactacgacagcaagatcaatctgaccattctgccggatcccaccgtggtagagcccagc
tttgagttctccggcgacgcatttacctttggcatcagcgattccatccccttcttcggc
ggttcttccgtgaagatcccgtatcctcccatcctggagcatctgaatatctgcatggat
gaaaacaagatccggatcggtatcaatgtggatcttccgattgtgtcaacggataaggag
gacaaggcggcattggataaattcgtagaggattttgaaaagctgaagaccaatttaaag
cgttctccttcggatctgctgcacgataagtccatcaacaccggaaagatcagcctgggc
aaggctgaggtcaaggtgcttggcggcggctatgtggagggtgacttctccgagagcggg
aaggcgatcctgaacggctacctctatatcggcattgaagccggcgtaaactttgattat
cagactgtggtatgggtaattccggtaaccgcagagcttggcctgaccggtaaaatcgta
gcaggcaccaccattaaattcacctacgacttcgatcatgcatggcagctggatgccaag
gtcaccgcacagggcaccttcggggtggaagtattcggcggtgtaggcttctccagcatt
gcagccattggcgtgtacggcggcgcagagctggatctggatatgcagctgtacgatacc
tccgatgattccggtccccggatcaataccctggatctcaccggcgagttgggcttccgg
gcatatgtgggaccctttgagtataagaaagcctgggcgagccagacatggcatctgtac
accaatccggagcttgcaaactccgaacaggatgcagcacccagctatctggcacccctg
tatgacaccgcagcctacagcgtaagcgaggagacccaggaggtttccaagtggctggga
ggcagcaagctggagccggacaaggtgcagactctgctgaccaatgccaacaatggggcg
gatccgcagcttgcaaccgatggcaccaactatgtgctggtatatctggaaaaggatccg
gcacggagcatatacgacgcatccagactgatgtacgctgtatacaccgctgaaaccggt
acctggagtgatccgaagccggtggatgaaaacgagaccggcgattatcagcccgctctg
ttcggcaatgcagacggcatttacctggcttaccaggaagcaaaccaggcattcggtgcg
gacagcgagctgacggtggatgcctatgcagcatccctgggggtaacctgtgcagtcttt
gacgctgagcagcagagcttcggggctgtaaccaccatgactgttccggaaaacagctgc
aattccattcccactgtctttgaagacggcggactggtatatgcagcctgggtatccaac
gcaaagggcgattatttcggcacagagggtgcaaacaccattttctacagcatctgcaca
gagggcacctggagtgaaccggctgcactggcttctgacctgacggcagtgaccggattg
cagatcggcaagctggaaagcggcgtgtccgttgcatgcatcaccgacggggataatgtt
ttgatcactgcggatgaccgtaccttgactctgattgcagcagacggcacacagcagcag
gtagtgaccggctgtgtatccgcacctgtctttgcacagcctgcatggtctgaatctccg
ctgctgatctggtacgatacctataacctcagctgcacggcggacggcaaggaaattgca
cagctctttgcacagggcatcagcggtctgaccgacgcatacaccctgctgccggacgga
gtcgtatataccagcgctggcaaggacggcagcgatctgttcctgatccgttacgatgcg
gcacagcaggcatggggcgcaccggttcagctgactgatacagagggctatatcaacggc
gcaggggctgcagtttgcggcgatcagctgctgatgaccatgctccggcagaacgtcacc
attacagaggatgatgtgcaggtagaaagcacattgtgcgcactgctccgcagcaccttc
agcgacctttccgttgacaaggtggactacgactttacgcagatccagcccggcagtcag
ctgcctctggatgtgactgtcaccaatcacgggaacagcacagtcaacagcgtgaccatc
ggggtatacaccaaggacggcacgctgatcagcacacaggacgtggaaaccacactcctg
tccggtacggcacaggtactcgccgcttccttccaggttccggaggatatgagcaccacg
gagtatcaggtgattgtatccgttccggatacaacggatgtaaacgaagcagacaatgca
gcagcgttcagcatcggctatacggagctttccttgacaaccgatcagttgattaccgca
cagggcacaaagctgcagatttgcgtgaccaatgaaagtcagattcccaccggcggtatt
ctggatctgtatcactatgatgaatcccaggatccggttctttccctgatcgtagaggag
ctgcagcctggtcagagtaccgtatacacagtggatgtggacgattccatcatctctgag
gacaaccggtatgtgatggtcaagctgactgcggatgaagcggagtatgatgaatccgat
aacgaggagctggttgctgtttatctgagcggaagccttcccaccgtaaccatcggggat
gtaaacggggatggggaaattaccgtcaatgacgccgttatgctcctggatgagtgtgca
gcccgtgcagtgggaaccacaaccctggacgaagcacagcggagtcgtggagacgtaaac
gaagacggttccatcacgctgacggatgccattctgattctcaattactgtgcggaaaag
ctggtagatccggagcttacgtttgcggattttctcaagaatgcaggaggaaacaatgaa
taa
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