Ruminococcus champanellensis: RUM_10060
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Entry
RUM_10060 CDS
T02600
Name
(GenBank) Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
KO
K05825
2-aminoadipate transaminase [EC:2.6.1.-]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00300
Lysine biosynthesis
rch00630
Glyoxylate and dicarboxylate metabolism
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
rch01210
2-Oxocarboxylic acid metabolism
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RUM_10060
09105 Amino acid metabolism
00300 Lysine biosynthesis
RUM_10060
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Motif
Pfam:
Aminotran_1_2
Asp_aminotransf
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CBL17172
UniProt:
D4LC27
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Position
1094653..1095849
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AA seq
398 aa
AA seq
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MNYVFSDKVSGLQASAIREILKFCAFPDVISFAAGNPAPEAFPTKVLAELSDSVMQTDPI
LALQYNITEGYTPLRDALKSWMGSRHCFEAGADDLIITSGAQQANELACKVLCNEGDTLI
CESPSFIGSLNAFRSYHVNLVGVEMEEDGIRLDLLEQALKDAKKAKLIYLIPNFQNPTGR
TMSWEKRKAVYALAQKYNAVILEDNPYGDLRFAGEDIPAIKTLDTDGRVIYTGTFSKILA
PGLRVGYVSAAEPIIQKIIVCKQVADVHTNIWAQVLCERFLATQNIEQHLAGLQKIYRHK
CNLMLEGMEQHFSRKITWTKPEGGLFIWATLPQGSDMMGFCKRAVSEYKIAVVPGTAFSI
RENDPSDSFRLNFSTPTDEQIVRGIEILGNMTRELLDK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgttttctctgataaggtaagcggcttacaggcttccgccatccgtgagatc
ctgaagttctgtgcgttcccggacgtgatctcctttgcggcaggaaaccctgccccggag
gcattccccaccaaggtgctggcggagctgtccgacagtgtgatgcagaccgatccgatc
ctggcactccagtacaacatcaccgaggggtacacccctctgcgggatgcgctgaaaagc
tggatgggctcccggcactgctttgaggctggtgccgatgatctgatcatcacctctggt
gcccagcaggccaacgagcttgcctgcaaggtgctgtgcaacgaaggggacacgctgatc
tgtgaatctcccagctttatcggctctctgaatgcgttccgttcctatcatgtcaatctg
gtgggcgtggaaatggaggaggacggcatccggctggatctgctggagcaggcgctgaag
gatgcgaaaaaggcaaagctcatttacctgattcccaacttccagaatcccaccggcaga
accatgtcctgggagaaacggaaggcggtatacgccctggcacagaagtacaacgccgtg
atcctggaggacaacccttacggggatctgcggtttgccggagaggatattcccgccatc
aagaccctggatacggacgggagagtcatctacaccggcaccttctccaagatcctggcg
ccgggtctccgggtgggctatgtgtctgcggcagagcctattatccagaagatcatcgtc
tgcaagcaggttgccgatgtgcataccaacatctgggcacaggtgctgtgcgagcggttc
ctggcgacccagaatattgaacagcatctggcagggcttcagaagatctaccggcacaag
tgtaatctgatgctggagggcatggagcagcacttctccaggaagatcacctggacaaag
ccggagggcggtttgtttatctgggcgaccctgccccagggcagcgacatgatgggcttt
tgcaagcgtgccgtgtccgaatacaagatcgctgtggtgcccggtaccgcattctccatt
cgggagaacgatcccagcgacagcttccggctgaatttctccacccccaccgacgagcag
atcgtccggggcattgagatcctggggaacatgacaagagaactgctggataagtaa
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