Ruminococcus champanellensis: RUM_11260
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Entry
RUM_11260 CDS
T02600
Name
(GenBank) RNAse M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RUM_11260
Enzymes [BR:
rch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
RUM_11260
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim_4
Toprim
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CBL17275
UniProt:
D4LCD0
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All DBs
Position
1233146..1233754
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AA seq
202 aa
AA seq
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MGETQAKLVISQAIIVEGKYDKIKLDSMIQGVILVTNGYRIFKDPEKMALIRYFAAHTGI
IILTDSDRAGFKIRGYLKGCVPKGKITHVYIPDIFGKEKRKEKPSAEGKLGVEGMQRSVL
EEAFRRAGVLTGSAPAGTGLTRLDLYELGLTGGKDSAIRRRALLTQLGLPALLSTAGMLE
VLNTMMTRQELEAFLHQHGNGD
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaacgcaggcaaagctggtgatctcccaggcaatcatcgtagagggcaagtac
gataagatcaagctggattccatgatccagggggtcattctggtgaccaacggctaccgt
atcttcaaggatccggaaaaaatggcactgatccggtattttgccgcccatacgggcatc
attatactgacagattcggatcgggctggctttaagatccggggatacctgaagggctgc
gtgccgaagggaaagatcacccatgtgtacattccggatatttttggaaaagaaaaacgc
aaggaaaagccctccgcagagggaaagctgggtgtggagggcatgcagagaagcgtgctg
gaggaggcgttccggcgggcgggcgtgctgaccggttctgcaccggcagggacgggactg
acccggctggatctgtatgagctggggcttaccggcggcaaggacagtgccatccggcgc
cgggcattgctgacgcagcttggattgcctgccttgttgtccactgcagggatgctggag
gtacttaatacgatgatgacacgccaggagcttgaggcgtttttgcatcaacatggaaat
ggagattga
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