Ruminococcus champanellensis: RUM_11950
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Entry
RUM_11950 CDS
T02600
Name
(GenBank) DNA-methyltransferase (dcm)
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00270
Cysteine and methionine metabolism
rch01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RUM_11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rch03000
]
RUM_11950
03032 DNA replication proteins [BR:
rch03032
]
RUM_11950
03036 Chromosome and associated proteins [BR:
rch03036
]
RUM_11950
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
rch02048
]
RUM_11950
Enzymes [BR:
rch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
RUM_11950
Transcription factors [BR:
rch03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
RUM_11950
DNA replication proteins [BR:
rch03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
RUM_11950
Chromosome and associated proteins [BR:
rch03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
RUM_11950
Prokaryotic defense system [BR:
rch02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
RUM_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
HTH_26
HTH_3
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CBL17334
UniProt:
D4LCI9
LinkDB
All DBs
Position
complement(1317428..1318651)
Genome browser
AA seq
407 aa
AA seq
DB search
MVAVSYNNLWKLLIDKGMNKTELKEASGISFNVMARMGKNETVSLESLEKICMVLNCNIG
DIMDITTQTEARIFSTIELFAGAGGLALGVEKAGFNTLGLVEVDKDASDTLRKNRPEWRV
INDDIANVSCLDLQEYFGLKQGELDLLSGGAPCQSFSYAGKRLGLEDARGTLFYHYAKFL
EQLQPKMFLFENVRGLLTHDKGRTYKTITDIFESTGYTIQKKVLNAWNYGVAQKRERLIT
IGIRNDLTNQIKFTFPTPHEYKPVLRDVLLDCPKSEGTPYSEYKRKIFELVPPGGYWRDI
PEDIAKEYMKSCWYMEGGRTGILRRLSLDEPSLTVLTSPSQKQTDRCHPLEPRPFTIREN
ARCQSFPDEWQFSGSIGSQYKQVGNAVPVNLAYDIAKQIKIALEGLS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtggcagttagctacaataatctctggaaattacttatcgacaaaggaatgaataag
accgaattgaaagaagcatcgggtatcagcttcaatgttatggctcgtatggggaagaat
gaaacggtttcccttgaaagccttgaaaagatatgtatggtgctgaattgcaatatcggc
gatattatggacattacgacacaaacagaagcaaggatattctcgaccattgaacttttt
gcaggcgcaggcggtcttgctctcggtgtggaaaaagcagggtttaacacacttggcctt
gtagaggtggacaaggacgcatccgacacacttcgcaagaacagacccgaatggcgtgtt
ataaacgatgatattgctaacgtttcctgccttgatctgcaagaatacttcggtttgaag
cagggcgaactcgatctgctttcgggcggcgcaccttgtcagagcttttcatatgcggga
aaaaggcttgggcttgaagatgcccgtggaacgctgttctatcactatgctaaattcttg
gaacagctccagcctaagatgtttctttttgagaacgttcgtggtctgctgactcacgat
aagggcagaacatacaagactattacagatatttttgaaagcacaggctacaccattcag
aagaaagtgctgaatgcgtggaactacggtgttgctcagaagcgtgaacgacttatcact
atcggtatcagaaatgatcttacaaatcagatcaagttcactttccctacaccacatgaa
tataagcctgttctccgtgatgtgctgctcgactgtcctaagagcgagggtacaccctat
tcggagtataaacgtaagatatttgagcttgttcctccgggcggatattggagagatatt
cctgaggatatcgccaaggagtatatgaaaagctgttggtacatggagggcggcagaacg
ggtattctccgcagactcagccttgacgagccgtcgctcacggtactgacttctccgagc
cagaagcagacagatcgctgtcacccccttgagcctcgtccgtttactatccgtgaaaac
gcacgttgccagagtttccccgatgaatggcagttcagcggaagtatcggctcacagtac
aagcaggtcggcaatgcagtacccgtaaaccttgcttatgatattgcaaaacagataaaa
atagcgttggagggattatcataa
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