Ruminococcus champanellensis: RUM_12410
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Entry
RUM_12410 CDS
T02600
Name
(GenBank) ABC-type transport system, involved in lipoprotein release, permease component
KO
K02004
putative ABC transport system permease protein
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rch02000
]
RUM_12410
Transporters [BR:
rch02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
RUM_12410
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsX
MacB_PCD
Motif
Other DBs
NCBI-ProteinID:
CBL17374
UniProt:
D4LCM9
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Position
1371348..1373534
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AA seq
728 aa
AA seq
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MGVCIKLATRSLRKNKGRTLITLMGIVLSVLMVCTIFTLLNSMLDSAIDSIIEKDGNWHI
AVYNTTAEQIADLEAAEGVLSTQMISIDENDVFRITLKNPDEVYEFASRYLSETTEYSYH
TELLSYLGISQSESIKSLIMGIAAALLLIIAVGAISLIYNAFAISVSERTKELGLLSSIG
ATQKDIRTIVYSEALLLGTVAIPIGIVLGLLTSWALLDIFGAYMGKVLYVNIGMRLHING
WLLMMTAIFGYLLVLLSAGVPARAASKISIIGNLKGEKGVMKVKCSNFTSSAENLLAKRT
IKREKKAFRAITFSLAISIFLFVSANAFSLYMLSFVEAERKNIGYDLRMNYSMEFGTKEF
DELYSFVKSQDGIDEVGWFAESPSHFHSVLLDSEWITDSYRGSDWATLKESSELYKAPFY
IFIISNERYSEFLSQNGLKNDNSVYASAFYDEIDEDSKSTSFPILKDGSYHADVRYMSEA
ASERLSQDINANPNDRFDYENYYDTFFSVNFTVGNYDFPLEFRPNYGGISILIPESRMPE
FNAEITSKEIMIQSPNYANIQKNTTDYLTSVGLAEDVSIFSSAESYESQRNFAAMIKLFS
TSFLILLTVISCANVFNVITTSLNMRKREFAVLRSVGMTVNKLFAMLCIENLRNGLLAIL
IGGISSLPLCYLIYKSIVVGAVIDFVFPLGAFVISSLAMFLIMFLTSLYGLWKIKNGDII
ADVRNDFV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttgtattaaacttgcaacaaggagcttgcggaaaaataaagggcgaacgctg
ataacacttatgggaattgtattgtccgtcctcatggtgtgtacgatttttacgctgtta
aattctatgctcgattctgcgatagattccattatcgaaaaggacggaaattggcatatt
gccgtgtataacaccaccgcagaacaaatagcagaccttgaagcggcagagggcgtttta
tccacccaaatgatctccattgacgaaaatgatgtattccgcattacacttaaaaatcca
gacgaggtgtacgaatttgcaagccgatatttaagtgaaacaacagaatattcgtatcac
acggaattgctttcctatctcgggatttcacaaagcgagagtattaagagcctaataatg
gggattgccgccgctttgcttcttatcatcgctgtgggtgcaatttctttgatatacaat
gcctttgctatatccgtttccgaaaggacgaaagaactcggacttttatcctcgattggt
gcaacccaaaaagatattcgcacgattgtatattccgaagctcttttacttgggacggtt
gcgataccgatcggtatagtcctcggtcttttgacttcttgggcgttgcttgatattttc
ggagcatatatggggaaagtactctatgtgaacattggtatgcggctgcatataaacgga
tggctgcttatgatgacagcaattttcggttatctgttggtgttactatccgccggtgtt
cctgctcgcgctgcttctaaaatttcgataataggcaatctgaaaggtgaaaaaggcgtg
atgaaagtaaagtgcagtaactttacttcttctgctgaaaatttgcttgcaaagcgtact
ataaaacgagaaaagaaagcgtttcgtgcaataacattttcgcttgcaatcagtatcttt
ctttttgtgtctgcaaatgcgttcagcctgtatatgctctcatttgtagaagcagaacgg
aagaacataggctacgatctgcgtatgaactattctatggagtttggcacgaaagaattt
gatgagctatacagctttgtaaaatcgcaggacggcattgatgaagtcggttggtttgcg
gaaagtccctcacatttccatagtgttttacttgattcggaatggataactgacagctac
cgaggctcggattgggctacacttaaagaaagctccgaattatataaagctccgttttat
atattcattatttcaaatgaacgctattccgagttcctttcgcaaaatggacttaaaaat
gataattccgtttatgcgagtgccttttatgatgaaatcgacgaggatagtaaaagcacg
agttttcctatcttgaaagacggaagctatcacgccgatgtgcgttatatgagtgaagca
gcgagtgaacggctcagccaagatattaacgcaaatccaaatgaccgctttgattatgag
aattattacgatacctttttcagcgttaattttacggttggcaactatgactttccgctt
gaattcagaccgaattacggaggcatcagtattttgattcccgaaagccgtatgcctgag
tttaatgcagaaatcacaagcaaggaaataatgatacaatccccaaactatgcgaacatt
caaaaaaacacaacggattatttaacgagcgttggtcttgccgaagatgtgtcaatattc
agttctgctgaaagctatgaatcgcagagaaactttgccgcaatgataaagctgttttca
acttcctttttaattctcttgaccgtaatatcctgtgcaaatgttttcaatgtcataact
acgagcctcaatatgcgtaagcgtgaatttgcggtattgcgttcggtaggaatgacggta
aataagctgtttgctatgctctgcatcgaaaacctgcggaatggtttgcttgcgatctta
atcggcggcatttcttctttgccgttatgctatctgatatataaaagcattgtagtcggt
gcggtaattgattttgtatttccgcttggagcatttgtaatatcttcattggctatgttc
cttattatgtttcttacatcgctatatgggctatggaaaatcaaaaatggagatattatt
gcggatgtcagaaatgattttgtgtga
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