Ruminococcus champanellensis: RUM_12950
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Entry
RUM_12950 CDS
T02600
Name
(GenBank) chromosome segregation protein SMC, common bacterial type
KO
K03529
chromosome segregation protein
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rch03036
]
RUM_12950
Chromosome and associated proteins [BR:
rch03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
RUM_12950
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CBL17423
UniProt:
D4LCS8
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All DBs
Position
1426268..1429834
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AA seq
1188 aa
AA seq
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MYLKSLELQGFKSFPDKIKLSFDKGLTAVVGPNGSGKSNIGDAVRWVLGEQSTKTLRGNK
MEDVIFSGTEARKPVGFAAVTLTIDNEQGELASEDREVSVTRRLFRSGESEYQINGKNVR
LKDINELFMDTGLGRDGYSIIGQGRIAEIVGAKSNERRDIFEEAAGISKFRYKKQEAERR
LHAAQENLVRLTDIVSELEGRVEPLRIQSGKAEKFLELAQQRKSLEISVWVNRLDTLREK
LDALSEEALVAAAEYENLQNDIDREEAKIAEGYTRMQESAMGVERLRGQILEIEQNSAAV
KADIAVSENDIQHSRAQIAQAEESHAAEQLSRTELTERIQAQQQRIAQLEQDAKDFAAQI
QEAQQAFAAQEQEAAAAGKAYDEAGSAVNALYLEQSQHRFTQQAAREQITQLKQTLEGGE
DTAARQAEQSAAYETALEQLSRQLEQAQNRIREQENRLGGYQRLYDSKMQKLAQQRKDWE
AATLRLREKQQRRRLLQDLENSMEGFGRSIKEILRAGKSGRISGIHGSVAQLVSVKPEYG
VAIETALGAAMQNIIVENEDIAKRCIRYLKEQRAGRATFLPLTSVRGNLLHEPNLSSMEG
FVALAAELAACDAKYEGIFRSLLGRIAIAEDIDCATVIAKRFGYKFRIVTLDGQVINAGG
SFTGGSAAHSSGVITRKNELDTLGTEIEALTAEQEGQRAAGERLKAETDKLRFDLDSTRD
ALSQAQTEVIRLTADRTAKQALAESARQQAATQQERVEQAKQSLARQEQLLAEATRALEQ
VDQSIARQEQALSAQQDLRSGLQQAREALSAQLAKLKLGQMECVKDQESARRELENMQQS
AEQSESRAAQLHAMLKEAEQLIVQKEQAIAHSRETLSRMQAETEACRQEITRLQGQHDSQ
QQYINQLREGMRAINEAKEKRAGEAMRIDERKITAQKDYDSLIMQLLETYELTRSEAEQL
AEPLEDLQKAQQTLAQIKGRIKALGNVNVGAIEEYREVSERYTFLSAQVADVTGSKRELE
KLIESLTEDMCRIFAESFVRINDNFKAIFKELFGGGHAELILTDPEHVLESGIEISVAPP
GKVIKNLISLSGGEQSFVAICIYFAILKLRPAPFCILDEIDAALDEANVRKYAQYLHRFT
EHTQFVLVTHRRSAMEEANVLYGVTMQADGVSRLLKLEQPDLDTTTQA
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtacttgaaatcacttgagcttcaggggtttaaatccttccctgataaaatcaagctg
agctttgacaaaggattgactgctgtagtgggaccgaacggcagcggaaaaagtaacatc
ggcgacgccgtgcgctgggtgctgggggagcaatccaccaagaccctccggggcaacaag
atggaggacgttattttttccggtactgaggctcgaaagcctgtcggttttgcggcggtg
accctgaccattgacaatgaacagggggagctggcgtcggaggatcgggaagtcagcgtg
acccggcggctgtttcgcagcggggaaagcgaataccagatcaacggcaagaatgtacgg
ctcaaggacatcaacgagctgttcatggatacgggtctgggcagggacggttactccatc
atcggacagggccgcattgcggagatcgtaggcgccaagagcaatgagcgccgggatatc
ttcgaggaggctgccggtatttccaaatttcgctataaaaagcaggaggcggagcggcgg
cttcatgcagcccaggaaaatctggtgcggctgacggatattgtgtcggagctggagggc
agagtggagcctttgcggatccagtccggcaaggcggaaaaattcctggagcttgcccag
cagcgcaagagcctggagatctccgtatgggtgaaccggctggataccctccgggagaag
ctggacgccttgtcagaggaggccctggtggcagcggcggaatatgaaaatctgcaaaac
gatattgaccgggaggaagccaagattgcagagggctacacccggatgcaggaaagcgcc
atgggggtggaacggctccggggacagatcctggagatcgaacagaacagcgccgctgta
aaggcggatattgcagtcagcgaaaatgatattcagcacagccgggcgcagattgcccag
gcggaggaaagccatgcggcagagcagctttcccgaacagagctgacagagcgcatccag
gcacagcagcagcggatcgcacagctggagcaggacgcaaaggactttgcggcacagatc
caggaggcacagcaggcatttgcagcccaggagcaggaggcagctgccgccggcaaggca
tatgacgaagcaggcagtgcggtgaatgccctgtatctggagcagagccagcatcgcttt
acccagcaggccgcccgggagcagatcacccagctgaagcagactctggaggggggcgag
gataccgccgcccggcaggcagagcagtccgcagcctatgaaaccgccctggagcagctt
tccaggcaactggagcaggcgcagaaccggatccgggaacaggaaaaccggttggggggc
tatcagcggctgtacgacagcaagatgcagaagctcgcccagcagcggaaggattgggag
gctgctaccctgcggctgcgggaaaagcagcagcgcagacggctgttgcaggatctggaa
aacagcatggagggctttggacggagcatcaaggagattcttcgtgccgggaaaagcggc
aggatcagcggcattcacggcagtgtggcacagctggtcagcgtgaagccggaatacggg
gtggccatcgaaaccgcactgggtgctgccatgcagaatatcattgtggaaaacgaggac
attgccaagcgttgcatccgctatctgaaggagcagcgtgccggcagagccaccttcctg
cccttgacctccgtccggggaaatctgctgcacgagccgaatctatccagtatggaggga
tttgtggcactggcggcggaattggctgcctgtgacgcaaaatacgagggaatattccgt
tccctgctgggacggatcgccattgcggaagacattgactgtgccacggtcatcgccaaa
cggtttggctataagttccggatcgtgaccctggacggacaggtcatcaatgcaggaggc
tcctttaccggtggctccgccgcccattccagcggggtgatcacccggaaaaatgagctg
gataccctggggacggagatcgaagccctgaccgcagagcaggagggtcagagggctgcc
ggggagcggttgaaggcggaaaccgataagctgcggttcgatctggacagcacccgggat
gcgctgtcccaggcacagacggaggttatccggctgacggcggatcgtactgccaagcag
gcactggcggaatccgcccgacagcaggctgccacccagcaggaacgggtggagcaggca
aagcagagtcttgctcgacaggaacagctgctggcggaagccacccgggcattggagcag
gtggatcagagcattgcccggcaggaacaggcactttctgcccaacaggatctgcgcagc
ggcttgcagcaggcaagggaggcactttccgcacagcttgccaagctgaagctggggcag
atggaatgcgtgaaggatcaggagtccgcccgccgggagctggagaatatgcagcagtcg
gcggagcagtccgagagccgggcagctcagttgcatgcaatgctgaaagaagcggagcag
ttgattgtccagaaggagcaggcgattgcccacagccgggaaaccctgtcccggatgcag
gcagaaacggaagcatgcagacaggagatcacccggctccaggggcagcatgacagccag
cagcagtacatcaatcagctgcgggagggaatgcgtgccatcaacgaagccaaggaaaag
cgtgccggagaggcgatgcggattgatgagcggaagatcacagcccagaaggattacgac
agtctcatcatgcagctgctggaaacctatgagctgacccgttcggaggcggagcaactg
gcggagcctttggaggatctgcaaaaggcgcagcagaccctggcacagatcaagggaagg
atcaaggcactgggcaatgtgaacgtgggcgccattgaggagtaccgggaggtatccgaa
cggtacaccttcctgtccgcacaggtggcggatgtgaccggctccaagcgggaactggaa
aagctgatcgaatccctgacggaggacatgtgccggatctttgcggaaagctttgtgcgg
atcaacgacaatttcaaggctattttcaaggagctgttcggaggcggccatgcggagctg
attctgacagacccggagcatgtactggaatccggcatcgagatcagcgtggcgcctccc
ggcaaggtcatcaagaatctgatttccctgtccggcggcgagcagtcctttgtggcaatc
tgtatttattttgcgattttgaagctgcgtccggcgcccttctgtattctggatgagatt
gatgcagcgctggatgaagcaaatgtgcgcaagtatgcgcagtatctgcaccggttcacg
gagcatacccagtttgttctggtcacgcaccgccgcagtgccatggaggaagccaatgtg
ctgtacggcgtgactatgcaggcagacggcgtttccaggctcttgaagctggaacagccg
gatctggacaccacgacacaggcgtaa
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