KEGG   Ruminococcus champanellensis: RUM_12960
Entry
RUM_12960         CDS       T02600                                 
Name
(GenBank) signal recognition particle-docking protein FtsY
  KO
K03110  fused signal recognition particle receptor
Organism
rch  Ruminococcus champanellensis
Pathway
rch02024  Quorum sensing
rch03060  Protein export
rch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RUM_12960
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RUM_12960
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RUM_12960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rch02044]
    RUM_12960
Secretion system [BR:rch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RUM_12960
SSDB
Motif
Pfam: SRP54 SRP54_N AAA_22 AAA_30 AAA_16 CbiA ABC_tran AAA_19 cobW Zeta_toxin nSTAND3 SLFN-g3_helicase YqeC DNA_pol3_chi MeaB PIF1 FtsK_SpoIIIE AAA_31 GTP_EFTU AAA_14 AAA_33 Thymidylate_kin ResIII DO-GTPase2 AAA_17 TrwB_AAD_bind MobB AAA_11 AAA_24 AAA_23 KAP_NTPase MMR_HSR1 AAA BBS2_hp Ploopntkinase3 Fe-ADH ATP_bind_1 AAA_5 TK MshEN Helicase_RecD APS_kinase Viral_helicase1 AAA_27 DUF87 NACHT nSTAND_NTPase7 NPHP3_N
Other DBs
NCBI-ProteinID: CBL17424
UniProt: D4LCS9
LinkDB
Position
1429847..1430806
AA seq 319 aa
MGLFSKIKEGLRKTKESMISGMQRVVNSFTKIDEDLFEQLEETMIMSDMGVETSVEICEK
LRKRVKERGVTDPGKIMELIQEIISEMMGEDVALDLSTTPSIILVIGVNGAGKTTTIGKL
CHQYKQQGKKVLVAAADTFRAAAIDQLEVWTQRAGVDLVKHAEGSDPAAVVFDAVTAAKA
RKTDVLICDTAGRLHNKKNLMEELRKINRIISQQAEGCAVETLLVLDATTGQNAVNQARL
FNEVADITGIVLTKLDGTAKGGIVISIKNELGIPVKLIGVGEQIDDLQPFDSRSFVTALF
ERTDKGEEQANEADHTGDE
NT seq 960 nt   +upstreamnt  +downstreamnt
atgggattattcagtaaaatcaaagagggactgcggaaaaccaaggaatccatgatcagc
ggcatgcagcgggtggtcaattcctttaccaagatcgatgaggatctgtttgaacagctg
gaggaaaccatgatcatgagcgacatgggggtggaaacctctgtggagatttgtgaaaag
ctgcgcaagcgggtcaaggagcggggcgtgacggatccgggaaagatcatggagctgatc
caggagatcatttccgaaatgatgggagaggatgtggcactggatctgtctaccacgccc
tccatcattctggtgatcggggtcaatggcgccggcaaaaccaccaccatcggcaagctg
tgccatcagtacaaacagcagggcaaaaaggtgctggtggcagcagcggataccttccgg
gcggctgccattgatcagctggaggtctggacccagcgtgccggggtggatctggtgaag
catgcggagggctccgacccggcggcagtggtgtttgacgctgtgactgctgcaaaggcg
agaaaaacggatgtactgatctgcgataccgcaggtcggctgcacaataaaaagaatctg
atggaggagctgcggaagatcaaccggatcatcagtcagcaggcggagggctgcgccgtg
gaaaccctgctggtgctggatgccaccaccgggcagaatgcggtcaaccaggcacggctg
tttaacgaggtggcggacattaccggcatcgtgctgaccaagctggacggcaccgcaaag
ggtggtattgtgatttccatcaagaatgagctgggcattccggtgaagctcatcggtgtg
ggagagcagatcgacgatttgcagccctttgacagccgcagctttgtaactgcattgttt
gaacggacggacaagggagaggagcaggcaaatgaagcagatcatactggcgacgaataa

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