Ruminococcus champanellensis: RUM_13130
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Entry
RUM_13130 CDS
T02600
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rch01011
]
RUM_13130
Enzymes [BR:
rch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RUM_13130
Peptidoglycan biosynthesis and degradation proteins [BR:
rch01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RUM_13130
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
CBL17439
UniProt:
D4LCU4
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All DBs
Position
1443449..1444465
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AA seq
338 aa
AA seq
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MRILTIVAAFAACFTLLPAAVLLTGREASAESTPRQPDSSEASGTEPIQPTASLEDYRVL
DITTGSVEAVSVRDYVIGAVCAEMPATFEPEALKAQAVAAHTYAERQRRSEAQSPTAELS
GADFSNDSRHYQAFYTLDQIKGFYGDSFDVYYPKVEAAVDAVLEEILCYQDAPIIAAFHS
LSTGVTEDAAQVWGSAIPYLVPVDSPADCDAPKYREEVTLTADVVKEKLLTAVPELKLSD
QPGDWFGEAKRTDFGTVCTMQVGDQSLGGQTLRGAFGLRSAAFTLFLEGDSFTFVTKGYG
HCVGMSQYGANAMAAEGSSYADILAHYYPGTELKDCRA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcttacgatcgttgctgcctttgcagcctgcttcacgctgctgcctgccgct
gtgctgctgacgggcagggaagcgtcggcggaatccacccccaggcagccggattcctct
gaagcatccggcaccgagcccatacagcccacagcatctctggaggattatagggtgctg
gatattaccaccggctccgtggaagccgtgtccgtccgggactatgtgatcggcgctgta
tgcgctgaaatgcctgccacctttgagccggaggcgctgaaggcccaggcggttgccgcc
catacctatgcggaacggcagcgcaggagtgaggcgcagtccccaacggcagaactatcc
ggggcggatttctccaacgacagccgccactaccaggcgttctataccctggatcagatc
aagggtttttacggagacagctttgatgtgtactaccccaaggtggaggcggcggtggat
gcggtactggaggagatcctctgttatcaggatgcccccatcattgcggcgttccactcc
ctttccaccggggtcacggaggatgccgcccaggtctggggcagcgccataccctatctg
gtgccggtggacagtccggcggattgtgatgcgcccaagtaccgggaggaggtgacgctg
acggcggatgtggtaaaggaaaagctgctgacggcggtgccggagctgaaattgtccgac
cagcccggggattggttcggcgaagcgaaacggacggatttcggcacagtctgcaccatg
caggtgggggatcagtccctgggagggcagacccttcgtggggcattcggtctgcgctcg
gcggcatttaccctgttcctggagggggacagctttacctttgtgaccaagggctacggg
cactgcgtagggatgagtcagtacggcgccaacgccatggcggcggagggcagcagctat
gcggacatccttgcccattactatccgggcacggagctgaaagattgccgggcataa
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