Ruminococcus champanellensis: RUM_14210
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Entry
RUM_14210 CDS
T02600
Name
(GenBank) Type II secretory pathway, pullulanase PulA and related glycosidases
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00500
Starch and sucrose metabolism
rch01100
Metabolic pathways
rch01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RUM_14210
Enzymes [BR:
rch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RUM_14210
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
hDGE_amylase
GHL10
Motif
Other DBs
NCBI-ProteinID:
CBL17530
UniProt:
D4LD35
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All DBs
Position
complement(1569946..1572048)
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AA seq
700 aa
AA seq
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MAVITNMPLIPVDTISGFPVRPGNHLIQGATAMPNAVNFTISSANATSCELLLFHRKEKT
PYAVIPIPDSYRIGDVFSIIVFGLDITEFEYAYRMDGPHDPRKGLLFNKERILLDPYARA
VTGQHEWGENAANDHQYHARVVTESFDWGDMRSPELPLRDLIIYEMHVRGFTRSSTSGVA
HPGTFAGILEKLPHLLALGINAVELMPVFEFNELEDARVIDGKTLYNYWGYNTVSFFSPN
TSYSSENEYNREGNELKQMIRVLHEHGIEVILDVVFNHTAEGNEQGSAFSFKGIDNNVYY
MLTPDGSYFNFSGCGNTFNCNHPVVQQFILNCLRYWATEYRIDGFRFDLAAIMGRNEDGS
PMRNPPLLRNLAYDPVLSKVKLIAEAWDAGGLYQVGSFSSLRRWAEWNGRYRDDLRCFLK
GDADMAQAAINRITGSTDLYDPVYRGDNASVNFLTCHDGFTLYDLYAYNTKHNEANGWNN
TDGDNCGNSWNCGAEGDTDNQEIRALRMRLIKNAFATLLCSRGAAMFLAGDEFCNTQFGN
NNPYCQDNEVSWLDWSLLEKNQEIFRFCRDMIALRKAHPCITENLEPASTNFPAVSIHNA
FPWHTDCHPDTRVIGILFSGKHPKTGADDMVFLGINTFWENQKIQMPDLPEHLYWHIACN
TALPHADPPIYQTQSSWEGCTNIWAAPRSVIVAYARVKGT
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcattacaaacatgcccctgatccccgtggataccatcagcggttttccggta
cgtccaggcaatcacctgatccagggggcaaccgcaatgcccaatgcagtcaactttacc
atttcctccgccaacgccaccagttgtgagcttctgctgtttcaccggaaggaaaagacc
ccctatgcagtgatccccattccggactcctaccggatcggagatgtgttctccatcatc
gtgttcgggctggatattacggaatttgagtacgcctaccggatggacggcccccacgat
ccccggaagggactgctgttcaacaaggaacggatcctgctggatccttacgcaagagcc
gtcaccggtcagcatgaatggggcgaaaatgccgcaaacgatcaccagtatcacgcacgg
gtggttaccgaaagctttgactggggcgatatgcgcagtccggagctccccctgcgggat
ctgatcatctatgaaatgcatgtccgcggctttacccggagcagcacttccggcgttgcc
catccgggcacctttgccggcattctggagaagctgccccatctgctggcgcttggaatc
aatgcagtggagctgatgccggtgtttgaattcaacgagctggaggatgccagagtcatt
gacggcaaaaccctgtacaattactggggctacaacaccgtcagcttcttctctcccaac
accagctacagctccgaaaacgaatacaaccgggagggcaatgaactcaagcagatgatc
cgtgtgctgcatgaacacggcattgaagtgatcctggatgtggtgttcaaccacacagca
gagggcaatgaacagggctccgccttcagcttcaagggcatcgacaacaacgtgtactat
atgctcacgccggacggcagctacttcaatttcagcggctgcggcaacaccttcaactgc
aaccacccggtggtgcagcagttcatcctgaactgtctccggtactgggcaacggaatac
cggatcgacggcttccggtttgacctggcagccatcatgggcaggaacgaggacggctct
cccatgcggaatccgcccctgctgcggaatcttgcctatgacccggtactcagcaaggta
aagctgatcgccgaagcatgggatgccggcgggctgtaccaggtgggcagcttctcctct
ctgcgccgctgggcggaatggaacggcagataccgggacgatctgcgctgcttcttaaag
ggagatgcggacatggcgcaggcagccatcaaccggatcaccggctctacggatctgtac
gacccggtataccggggggacaatgcctctgtcaattttctcacctgtcacgacggcttt
accctgtatgatctgtacgcctacaacaccaaacacaacgaagccaacggctggaacaat
acggacggggacaactgtggaaacagctggaactgcggcgctgagggagacacggacaat
caggaaatccgggcactgcgcatgcggcttatcaagaacgcctttgccaccctgctgtgc
agccggggtgcagccatgttccttgcgggagatgaattctgcaacacccagttcggcaac
aacaatccctactgtcaggacaacgaagtatcctggctggactggtccctgctggagaaa
aatcaggaaatcttccggttctgccgggatatgatcgctctgcggaaggcacacccctgc
attacagaaaatctggaaccggcaagcaccaacttccccgccgtcagcattcacaatgca
tttccctggcatacagactgtcacccggatacccgggtcattggcattctcttttccggc
aagcatccgaaaaccggagcggacgatatggtattcctgggcatcaacaccttttgggaa
aaccagaagatccagatgccggatctgccggagcatctgtactggcacattgcctgcaac
accgccctgccccatgcggatccccccatttaccagacccagagcagttgggagggctgc
accaacatctgggctgcccctcgttccgtgatcgtggcttatgcccgggtgaagggaacc
tga
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