Ruminococcus champanellensis: RUM_14960
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Entry
RUM_14960 CDS
T02600
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RUM_14960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rch03021
]
RUM_14960
03400 DNA repair and recombination proteins [BR:
rch03400
]
RUM_14960
Enzymes [BR:
rch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RUM_14960
Transcription machinery [BR:
rch03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RUM_14960
DNA repair and recombination proteins [BR:
rch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RUM_14960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
RAD51D_N
PASTA
Motif
Other DBs
NCBI-ProteinID:
CBL17593
UniProt:
D4LD98
LinkDB
All DBs
Position
1626619..1627575
Genome browser
AA seq
318 aa
AA seq
DB search
MLEKIEKPEIDTVELRSDGKYGKFVLAPLERGYGITLGNSLRRVLLSSLPGVAVNSVKID
GVHHELSTIPGVKEDVTEIILSIKGLTAKLYGDGPKTVYIEATGECEVTAGDIKTDSEVN
ILDPGMHIATLGKDASLYMEITLDKGRGYVSAERNKQLMPNLPIDVIAVDSIYTPVLKVN
YTVEDTRLGQVTDYDKLTMEVWTDGTISAKEALSQAANLLNEHLKLFVDLSEEASIAEVL
VEKDDKGKEKILEMTIEELDLSVRSFNCLKRAGINTVDDLINKSEEEMMKVRNLGKKSFD
EVKEKLQSLGFDLSSEEE
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaaaatagagaagccggaaattgacactgtcgaactgagaagtgacgggaaa
tacggtaaattcgttttggctccgctggagcgtggctacggcattacgctcggcaacagc
ctcagacgagttctgctctcctccctgcccggtgttgcagtcaattctgtaaagattgac
ggcgtacaccacgagctgtccacgatcccgggtgtaaaggaggatgtcactgagatcatc
ctgagcatcaagggtctgactgcaaagctgtatggagacggcccgaagactgtttacatt
gaagcgaccggtgaatgtgaagtcactgcgggcgatatcaagactgactccgaggtaaac
atcctggatcccggcatgcacattgcaaccctgggcaaggacgcttccctttacatggag
atcacccttgataagggcagaggttatgtatctgctgaacgcaacaagcagctgatgccg
aaccttccgattgatgtcattgcggttgatagtatttatactcctgttttgaaggtaaac
tacacggttgaggacactcggctgggtcaggttaccgactatgacaagctgacgatggaa
gtgtggaccgatggtaccatttccgcaaaggaagcgctgtcacaggcagccaatctcctc
aacgagcatctgaaactttttgtggatctgtctgaagaggcaagcattgcagaagttttg
gttgaaaaagacgataagggtaaggaaaaaatccttgagatgaccattgaggaacttgac
ttatccgtgcgttccttcaattgcctgaagcgcgccggaattaacacagtggacgacttg
atcaacaagtctgaagaagaaatgatgaaggttcggaacctcggtaagaaatccttcgat
gaggttaaggaaaagctccagtccctgggctttgacttgagttccgaggaagaataa
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