Ruminococcus champanellensis: RUM_15590
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Entry
RUM_15590 CDS
T02600
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rch03400
]
RUM_15590
Enzymes [BR:
rch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RUM_15590
DNA repair and recombination proteins [BR:
rch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RUM_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CBL17650
UniProt:
D4LDF5
LinkDB
All DBs
Position
complement(1694876..1698223)
Genome browser
AA seq
1115 aa
AA seq
DB search
MLHLIIGGAGCGKSTRLIGQIRKAYEQGEQIYALVPEQYSFTNDLKLYEALGPTAFNAIQ
SLSFTSLARALFQQYGGRSGEYADDLTKTILLYQSIRALSDSSAFSHFDRQAKKPAFQDA
AAKAITELRRGSISPEALLEQTARLEGRLRDKAADLAVLYGDYDRQLREKGYKDSLTDIT
EAAALCAGNEHFKGALLFLDEFESFTGDQMEFLDVLFAQAKELWITLRTEDPEAPAYSVF
DATNATYRRLLALAQKHGTGHEVLLCKEPFRFRYPDLAHISRSILRPVHTQLPTAEHIHV
FEAKNCYTEADCACAHIRKLVREQGVRYADIAIVTHQLEEYAGILESACIRYSIPFHLDR
KISCMHTALLQLMSGVLELISEKRPRTETLLRYAKTRLLGISCERTARLESYCYTWNVDG
MMWLEPFTAGLEENSDLEALRLELVEPIMQLREACRGQNVRTLCKNLYQFLCRMNVPKNI
SGIAQDYQEAGCTAEASALKALWGSLADVLDALCNVLGDAVLPTSRFRDLMQALLSRISY
STPPQSLDAVLVASAETARLNAPKYVFVLGVSEGFFPSQVHSTGLFTDADKQQLEARELF
LSRSTEQLIGDERLIAYKTLSSASDGLYLFYPLSDAAGSSRSPSALIQQIRDMFDAPMLR
IAEQEDPCMYAATPRAAYDLTVQGFYRHTTEGASIREALKSDPVYGPRLASLDTLALTPE
HRIAHTERIRELFGDRLYLSATRLETYNLCPFQYYMNYGLGIRADQKKEINPLETGNLVH
YCLEQLLTGCPDKESFDALTEAEVTARVEQYAAQYLEQAMGGSFGKDARFASNYRRITGS
IPPLIRHLQQELSQSAFRPVSMELKLSRQDGSIPVTLTTPSGIQLILGGKIDRVDLYEEN
GTRYIRVIDYKTGKKEFDLGKLLYGVDMQMLLYLFSITEPEGKYGGAVPAGVLYVPAGGL
PCGRSRSQEDAQLEEYINQQYLMNGVMLKERSVLTAMEEHLAGIYIPATLAKDDPGEGEP
KLKSVSGSAYLTREQFANLRTHARQVLTDMAEQLYGGRIPADPLVIGQKTPCAYCDCKEI
CGNVPNVTCRTYEKTAKEQMLERISGEEKEESEHA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatctcatcatcggcggcgcaggctgcggaaaatccacccggctgatcggacag
atccggaaagcctatgaacagggggaacagatctatgccctggtgccggagcaatactcc
tttaccaacgatttaaagctgtacgaggcactgggaccgacggcgttcaatgccatccag
tccctcagcttcaccagccttgcccgggcactgtttcagcagtatggagggcgaagcgga
gaatatgcggacgatctgaccaagaccattctgctgtatcagagcatccgggcactcagc
gacagcagcgccttttcccactttgaccgacaggcaaaaaagcccgcctttcaggatgct
gccgccaaggccatcacggagctgcgccgaggcagcatctccccggaagcactgctggag
cagaccgcaaggctggagggcaggctccgggataaggcggcggatctggcggtgctgtac
ggggattacgaccggcagctccgggagaagggctataaggacagtctgacggatattaca
gaggcagccgccctctgtgccgggaatgagcattttaaaggcgctctgttgtttctggat
gaatttgaaagctttaccggcgatcagatggaattcctggatgtgctgtttgcccaggca
aaggagctctggatcaccctgcggacggaggatccggaagcccctgcctactcggtgttt
gacgctaccaacgccacctaccggaggctgctggcactggcgcaaaagcacggcaccgga
cacgaagttcttctttgcaaggagccttttcgattccgttacccggatcttgcccatata
agccggagcattctgcggccggtgcatacccagctgccgacggcggagcacattcatgtg
ttcgaggcaaaaaactgctatacagaagcggactgcgcctgtgcccatatccgaaagctt
gtccgggagcagggggtgcgctatgcggacatcgccattgtcactcaccagctggaggag
tatgcaggaatcctggaatccgcctgcatccgctattccattccctttcacctggacaga
aaaatctcctgcatgcataccgccctgctgcagctcatgtccggggtactggagctgatc
agcgaaaaacgtccccggacagagaccctgctccggtatgcaaaaacccggctgcttggc
atctcctgtgaacggactgcccggttggaatcctactgctatacctggaacgtggacggt
atgatgtggctggagcctttcaccgccggactggaggaaaacagcgacctggaggcgctg
cgcctggaactggtggagccgatcatgcagctgcgtgaggcatgccggggacagaatgtg
cgaaccctctgcaaaaatctgtaccagttcctttgccggatgaatgtgccgaaaaacatc
agcggcatcgcccaggattaccaggaggctggctgtacagcggaggcatccgccctgaaa
gccctgtggggcagtctggcggatgtgctggacgcactgtgcaatgtgctgggagatgcg
gtgctgcccacatcccggttccgggatctgatgcaggcgctgctgagccggatcagctac
agtacgcccccccagtctctggatgcggtactggtggcgtccgccgaaacagcccggctg
aatgcccccaagtatgtgtttgtactgggggtcagcgaaggcttcttccccagccaggtt
cacagcaccgggctgtttaccgatgcggacaagcagcagctggaggcacgggagctgttt
ctttcccgttctacggagcagctgatcggggacgagcggctgatcgcctataaaaccctg
tcctccgcctctgatgggctgtatttgttttatcccctgtcagacgctgccggcagcagc
cgcagtccatctgctctgatccagcagatccgggatatgttcgatgcccccatgctccgg
atcgccgagcaggaggatccctgcatgtatgccgccacgccgagagccgcctacgacctg
acagtacagggcttttaccggcacacaacagagggtgcaagcatccgggaagcgctgaaa
tcagatccggtgtacggtccccggctggcgtccctggacacccttgcattgacgccggag
catcggatcgcccacacggaacggatccgggagctattcggagaccggctgtatttgtcc
gccacccggctggagacctataacctgtgccccttccagtattacatgaactatgggctg
ggcatccgggcagatcagaaaaaagaaatcaacccgctggaaactggcaatctggtgcat
tactgcctggagcagttgctgaccggctgtccggataaggaaagctttgacgcactgacc
gaagcggaggtcactgcccgggtggagcagtatgcagcccagtatctggaacaggcaatg
ggaggcagcttcggcaaggatgcccggtttgcaagcaactatcggcgcatcaccggaagc
attccgcccctgatccggcatttacagcaggagctttcccaatccgcattccgccccgta
tccatggagctgaagctatcccggcaggacggcagcataccggtaactcttaccactcct
tccgggatccaactgatcttagggggcaagatcgaccgggtggatctatatgaggaaaac
ggcacccggtatatccgggtcatcgactacaaaaccgggaagaaggaatttgacctggga
aagctgctgtatggggtggacatgcagatgctgctgtacctgttttccatcaccgagccg
gagggtaaatacggtggggcagtgcccgccggcgtgctgtatgtgcctgccgggggactg
ccctgtggtcgtagccgcagccaggaggatgcccagctggaggagtacatcaatcaacag
tatctgatgaacggcgtcatgctcaaggaacgcagtgtgctgaccgccatggaggagcat
cttgcaggcatctacattccagcaacgcttgcaaaggatgatccgggagagggagaacca
aagctgaaatctgtcagcggctccgcatacctgacaagggagcagttcgccaacctgcgc
acgcatgcaagacaggtactgacggacatggcggagcaactgtatgggggacgtattccg
gcagatccgctggtgatcgggcaaaaaacaccctgcgcctactgtgactgcaaggaaatc
tgcggcaatgtgcccaatgtgacctgtcgcacatatgagaaaacagcaaaggaacagatg
ctggagcggatctccggcgaagaaaaggaggaatcggaacatgcgtaa
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