KEGG   Ruminococcus champanellensis: RUM_17640
Entry
RUM_17640         CDS       T02600                                 
Name
(GenBank) CRISPR-associated protein, Csd1 family
  KO
K19117  CRISPR-associated protein Csd1
Organism
rch  Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:rch00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rch02048]
    RUM_17640
Prokaryotic defense system [BR:rch02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    RUM_17640
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: CBL17827
UniProt: D4LDY2
LinkDB
Position
1887924..1889765
AA seq 613 aa
MLIKALCDYAEKQQASSSQNASVPEYYRPQKISYRIVLSPEGKLLDILPQRHLETYYDKK
GKEKQKDVPDTIYLPMRNKTSIVQAYYLDHRPLYIFGLNYVKENGQEIWTPDDETNKARR
SHKAFVEHELAFMDGLDSEICTAYRRFLETWDPEQETENPVLRQLGAAYSGSYFGFTLGV
GKANLEEDPELIAKYQKICQQDDCRTDEPADTVCSILGERLSIARKHNPFDFPNQTGCRL
VCMKHSAYESYCKEKSFNSGVSEKAMKLYTDQLNKLLQDRQHHVILEGMTVVFFAMCQND
EAQCDFFASMLGGSTDQQTEQSIQKLLTYAKGGYTGDPEAIRRMEEMNNTTFYIVGLTNT
ITRVSQKFIYRDRFGNLIQNLLKHQEDLRIREQDTHPIPFKWINKELVSPKSSNKDVPPP
LESSIILAALQNTRYPDALLATVVRRVKTDQDDENDAKGGKYIKLNRVRAGIIKACLNRK
NHKEEITMAWNEENRNPAYICGGLFAVYEKLQKDATKGPLNRTIKDAYFSSACSRPASVF
PTLAKLSQNHLHKLDEERVRVFYGRLVGSLMNQLEGEFPQTLSLDDQGRFIIGYYQMNQK
LWTSKEETKEDEN
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgctgatcaaagcgttgtgcgactatgcggaaaagcagcaggcttcatcttctcaaaat
gcctccgtaccggaatattaccggccacagaagatctcctaccggattgtgctttcgccg
gaggggaaactgctggatattcttccccagcggcatttggagacttattatgacaaaaag
ggtaaggaaaagcagaaggatgttccggatacgatctatttgccgatgcgaaataagact
tcgattgttcaagcgtattatttggatcatcggccgctgtacatatttggactcaattat
gtaaaagagaatggtcaggaaatctggacaccggatgatgaaacaaataaggcaaggaga
tcccataaagcatttgttgaacatgagctggcatttatggatggtctggattctgagatt
tgcacggcatatcggcgttttcttgaaacctgggatccggagcaggaaacggaaaacccg
gttctccggcagttgggtgctgcttatagcggttcttactttggatttacccttggcgta
ggcaaggcgaatctggaggaagatccggaactgatcgccaaataccagaaaatttgtcag
caagacgattgcagaacagatgagcctgcggatacagtttgcagcattcttggggaaagg
ctctcgattgcacggaagcataatccattcgattttccgaatcagaccggttgtcgactt
gtttgcatgaagcatagtgcttatgaatcctattgtaaagaaaaatcttttaatagcggt
gtttcagaaaaggctatgaaactctacacggaccaactgaacaagctgctgcaggatcgg
caacatcatgtgattttggaaggtatgacagtggtgttctttgccatgtgccagaatgat
gaggcgcagtgtgatttctttgcttccatgctgggcggctcgacggatcagcaaacagaa
cagagcatccagaagctgctgacttatgcgaaaggcggatacacgggagatccggaagcg
atccggcggatggaggaaatgaataatactactttttatatagtgggcttaacgaacacc
ataacccgtgtcagccagaagtttatttaccgggatcggttcggaaatctgattcagaat
ctgttgaagcatcaggaggatctgcggatccgggagcaggacacacatcctattcccttt
aagtggatcaacaaagaactggtttcgccgaaatcgtccaataaggacgtaccgccacct
ttggaatccagcatcattctggcggctttgcagaacacccggtatccggatgctctgctg
gctaccgtggttcgtcgggttaagacagaccaggacgatgagaatgacgccaagggcgga
aaatatatcaagttgaatcgggtgcgggcagggatcattaaggcttgcctgaaccgaaaa
aatcacaaggaggaaatcactatggcgtggaacgaggaaaacaggaatccggcatatatt
tgtggaggattgtttgcagtgtatgagaagctccagaaagacgctacgaagggacccctg
aaccggacgatcaaggatgcatatttttcttctgcatgctcccgaccggcaagcgtattc
cccacactggcgaagctgtcccagaatcacctgcataagctggacgaggagcgtgtacgt
gttttttacgggcggcttgtaggcagcttaatgaatcagctggagggagagtttccacaa
accttgtcgctggatgaccaggggcggtttattatcgggtattatcagatgaatcagaag
ctgtggacaagtaaggaagaaacaaaagaagacgagaattga

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