Ruminococcus champanellensis: RUM_18320
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Entry
RUM_18320 CDS
T02600
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rch03032
]
RUM_18320
03036 Chromosome and associated proteins [BR:
rch03036
]
RUM_18320
03400 DNA repair and recombination proteins [BR:
rch03400
]
RUM_18320
DNA replication proteins [BR:
rch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RUM_18320
Chromosome and associated proteins [BR:
rch03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RUM_18320
DNA repair and recombination proteins [BR:
rch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RUM_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CBL17885
UniProt:
D4LE40
LinkDB
All DBs
Position
1942775..1943050
Genome browser
AA seq
91 aa
AA seq
DB search
MTKADLIDAIAASAGSSKKDAERALQVVLSTITEKLAAGEKISLIGFGTFEVRERKEKTC
INPRTKEKLTAPACKAPVFKAGKALKDAVNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggcagatttgattgacgccattgcggcatcagccggttccagcaagaaggat
gcggagcgtgcgctgcaggttgtcctcagcacgatcaccgagaagctcgctgcgggtgag
aagatttctctgattggttttggtacctttgaggtgcgtgaacgcaaggagaaaacctgt
atcaatccccgaaccaaggagaagctgactgcacccgcttgcaaggcacctgtgtttaag
gcgggaaaagcgttgaaagacgctgtaaataagtaa
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