Ruminococcus champanellensis: RUM_19060
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Entry
RUM_19060 CDS
T02600
Name
(GenBank) hemolysin TlyA family protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rch03009
]
RUM_19060
Enzymes [BR:
rch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
RUM_19060
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
RUM_19060
Ribosome biogenesis [BR:
rch03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RUM_19060
23S rRNA modification factors
RUM_19060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_11
Methyltransf_25
Methyltransf_12
MerR
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
CBL17949
UniProt:
D4LEA4
LinkDB
All DBs
Position
2018279..2019064
Genome browser
AA seq
261 aa
AA seq
DB search
MGMRLDSRLVTLGLASSRARAKELICGGQITVNGVPARKASAEVSDSDEILCTGGQLPFV
GRGGLKLAHGVEQFHISLAGLTCLDIGASTGGFTDCMLQNGAARVYALDVGHDQLAQKLR
RDLRVVNLEGVNIRDVRPEEFPSFDFIGTDVSFLSLGYVFPAATRLLKAGGTMIALIKPQ
FEAGPKALNKHGVVKQPKDHLHSIESVLASAQQHHFSIQGLIPSPIRGGSGNREYLLYLK
KGGISRMPDAAAVVRCAFEAE
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgcgacttgacagccggcttgtgacccttgggctggcttccagccgtgccaga
gccaaggaactgatctgcggcggacagatcacggtaaacggcgtgcctgcaaggaaagct
tctgctgaagtatccgattcggatgagattctctgtaccggcggtcagctgccttttgtg
ggcagaggcggcttgaagcttgctcacggggtggaacagttccatatatcccttgccggg
ctgacctgcctggatatcggtgcatccaccggcggctttacggactgcatgctacaaaat
ggtgctgcaagggtgtatgccctggacgtggggcacgatcagcttgcccagaagctccgg
cgggatctccgggtggtgaacctggagggggtgaacatccgggatgtgcgtccggaggag
tttccgtcctttgattttattggtacggatgtttccttcctgtcccttgggtatgtattt
ccggcagcgacccggcttctgaaggcgggtggaaccatgatcgccctcattaagccgcag
tttgaagcaggccccaaggcactcaataagcatggagtggtcaagcagcccaaggatcat
ttacacagcatcgaatcagtgcttgcatcggcacagcagcatcatttctccatacaaggg
ctgatcccgtctccgatccggggcggcagcggcaaccgggaatatctgctgtatctgaaa
aagggcgggatatcccggatgccggatgcggcggcggtggtcagatgtgcctttgaggca
gaatga
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integrated database retrieval system
