Ruminococcus champanellensis: RUM_19830
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Entry
RUM_19830 CDS
T02600
Name
(GenBank) dipeptidase, putative
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00300
Lysine biosynthesis
rch01100
Metabolic pathways
rch01120
Microbial metabolism in diverse environments
rch01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RUM_19830
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rch01002
]
RUM_19830
Enzymes [BR:
rch01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RUM_19830
Peptidases and inhibitors [BR:
rch01002
]
Metallo peptidases
Family M20
RUM_19830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CBL18017
UniProt:
D4LEH2
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All DBs
Position
2091599..2093020
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AA seq
473 aa
AA seq
DB search
MEESVALRSYFQAHKQEMIDTLAAWVAVPSVRGDAKPGMPYGAEPARMLKLALEQCAALG
FQTESVANCMGSVELNDLPAALAVLCHLDVVPAGEGWSQDPFVLIYRQDTDRLYGRGAID
NKGPAVAALYAMRAIRELHIPMKHGVRLLLGTDEENGSSDLTAYLQQRTMPPMVFTPDGD
YPVINIEKGMLRLTLTADMKPVESGCRVEAMEGGTVVNGVPACASARIRDCSRQQLESLC
KQLPEGIRADLSETDGCCCVTLQGLSAHASKPELGKNALTALLDLLVQLPLPDEQHALLN
VLHAAYPYGDTDGTALGIGCRDEKSGALTHVLSLLTYQKGRLTAWVDLRYPLCGDGEAII
ARITEVLQSGGISTQLQMHHKPHETPESSPFVRTLLDVYAQSTGQQAHALAIGGGTYVHD
IPGGVAFGAEFPGEENQMHGGDESIRVESFLKIAELTALAMIRLCGDASEEML
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatccgttgcactgcgatcctattttcaagcgcataagcaggaaatgatcgat
accctggcggcctgggtggctgtccccagcgtccgtggagatgccaaacccggcatgccg
tatggagcagaaccggcccggatgcttaagctcgccctggagcaatgtgccgccctggga
tttcaaacagaatctgtggcgaactgtatgggcagtgtggagctaaatgatctgcctgcc
gcactggctgtactgtgtcatctggatgtggtaccggcaggggagggctggagtcaggat
ccctttgtgctgatctatcggcaggatacggatcggctctatggcagaggagccattgat
aacaagggtcctgcggttgctgctttgtatgctatgcgtgccatccgggagctgcacatt
ccgatgaagcatggagtacggctgcttttggggacggatgaagaaaacggctcctccgat
ctgactgcctatttgcagcagcgcaccatgccgcccatggtgtttacgccggacggagac
tatccggtcatcaacattgaaaagggcatgctccggctgaccctgaccgcagacatgaag
ccggtagaatccggctgccgggtcgaagctatggagggcggtactgtggtaaacggagta
cctgcctgtgcaagtgccaggatccgggattgcagcagacaacagctggagtccttgtgc
aaacagctgccggaggggatccgggctgacctgtccgaaacggatggttgttgctgtgtg
accctacagggactcagcgcacacgcctccaagccggagttgggaaagaatgccctgacc
gctttgctggatctgctggtgcagctgcccctgccggatgaacagcatgccctgctgaat
gtcctccacgcagcgtacccatatggagacacggatggtacggctctgggcatcggctgc
cgggatgaaaaatccggtgcactgacccatgtattaagtctgctgacctatcagaagggc
aggctgactgcctgggtggatctgcgatatcccctttgcggagatggggaagccatcatt
gccaggatcacagaggtactgcagtccggcggtatttccacacagttgcagatgcaccac
aagccccatgaaacgccggagagcagtccttttgtacggactttgctggatgtgtatgcc
caaagcaccgggcagcaggcacatgcacttgccatcggaggcggtacttatgtacacgac
attcccggcggtgtggcattcggcgcagaatttcccggagaggaaaatcagatgcacggg
ggcgatgagtccatccgggttgagagctttctgaaaattgcagaattgaccgcccttgcc
atgatccggctttgcggcgatgcctcggaggaaatgctatga
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