Ruminococcus champanellensis: RUM_20770
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Entry
RUM_20770 CDS
T02600
Name
(GenBank) ABC-type antimicrobial peptide transport system, ATPase component
KO
K02003
putative ABC transport system ATP-binding protein
Organism
rch
Ruminococcus champanellensis
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rch02000
]
RUM_20770
Transporters [BR:
rch02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Putative ABC transporter
RUM_20770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_25
AAA_29
AAA_16
RsgA_GTPase
nSTAND1
nSTAND3
NACHT
NB-ARC
TsaE
AAA_23
AAA_30
DO-GTPase2
MMR_HSR1
AAA_28
MobB
Pox_A32
AAA_15
DUF5906
Motif
Other DBs
NCBI-ProteinID:
CBL18100
UniProt:
D4LEQ5
LinkDB
All DBs
Position
2195945..2196637
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AA seq
230 aa
AA seq
DB search
MDHTYVVETKNLVKVYGRGETTVRAVDDVTMQIEPGEFVALVGESGSGKTTLLNLLGALD
TPTSGEIIIGGQSLAGQSDAQLSAYRRRNVGFIFQSYNLIPVLNVAENIALPMSLDNQEV
DQDYLSELLEILGLTDRRDYYPHQLSGGQQQRVAIGRALIAKPKLLLADEPTGNLDSRNS
REIVTLLQNSVRKYNQTLLLITHDGHVAAHADRVLHMLDGRLWDGAEEGV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggatcatacatacgttgtagaaaccaaaaatcttgtaaaggtgtatggacggggagaa
accactgtccgggcggtggacgatgtgaccatgcagattgagccgggagaatttgttgcg
ttggtgggggaaagcggaagcggtaaaaccactctgctgaacctgctgggggcgctggat
acgcccacctccggtgagatcatcattgggggacaaagccttgccggtcagtcggatgca
cagctttccgcataccggcgccggaatgtgggattcatattccaatcctacaatctgatc
ccggtgctgaatgtggcggagaatattgccctgcccatgagtctggataaccaggaggtg
gatcaggactatttgtctgagctgctggagattctggggctgacggatcgacgggattat
tatccccatcagctgtccggcggtcagcagcagcgtgttgccattggcagagccttgatt
gcaaagcccaagctgctgctggcggatgagccgaccggaaacctggacagccggaacagc
cgggagattgtgacccttttgcagaattctgtgcggaagtataaccagaccctgctgctg
attacccatgacgggcatgtggcagcccatgctgaccgggtgctgcatatgctggacggc
aggctgtgggacggtgcagaggagggcgtatga
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