KEGG   Ruminococcus champanellensis: RUM_23250
Entry
RUM_23250         CDS       T02600                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
rch  Ruminococcus champanellensis
Pathway
rch02024  Quorum sensing
rch03060  Protein export
rch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    RUM_23250
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RUM_23250
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RUM_23250
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rch02044]
    RUM_23250
Enzymes [BR:rch01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     RUM_23250
Secretion system [BR:rch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   RUM_23250
  Eukaryotic Sec-SRP protein
   RUM_23250
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA cobW Zeta_toxin AAA_33 KTI12 ArsA_ATPase APS_kinase nSTAND3 NPHP3_N Thymidylate_kin AAA_22 AAA_17 6PF2K MeaB CLP1_P AAA_31 ParA AAA_18 MobB BORCS8 Glyco_transf_4 AAA HTH_Crp_2 ArlS_N
Other DBs
NCBI-ProteinID: CBL18317
UniProt: D4LFC2
LinkDB
Position
complement(2474643..2476025)
AA seq 460 aa
MAFEGLSEKLNHVFKKLKSRGKLSESDVKDAMREVRMALLEADVSYKVVKDFVAKVSQRC
VGEEVLSSLTPAQQVVKIVNDELIALMGNDNARINMPSKPPCVIMMCGLQGSGKTTHAAK
LAKYLKREGHRPLLVACDIYRPAAINQLMVVGEKAGVKVFEMGQIDPVVISTQAMRYAKD
YGHDVVILDTAGRLHIDEKLMDELKQIKAKVEPNEIMLVVDAMTGQDAVNVAKAFDEALG
IDSVLMSKLDSDTRGGAALSVLAVTGKPIKFVGMGEKLDEFERFHPERMASRILGMGDVL
TLVEKAEAVMSKSDAEKLTKKLQEHSFDMNDLLDQLKQIRKMGSLKSIISMLPGVGDKVK
DMDVDEKQFSRIEAMITSMTKKERAKPSIINPQRKRRIAAGSGTKVEDVNRLLKQFEQMQ
QFMKQMGGGGKTKMFARRARKQLAGMNFDKMGNPGGKLPF
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggcatttgaaggtctgtccgaaaagctcaaccacgtctttaaaaagctcaaatcccgc
ggcaagctgtcggagagcgacgtcaaggacgccatgcgggaggtccggatggcgctgctg
gaggcggacgtcagctataaggtcgtcaaggattttgtggcaaaggtatcccagcgctgc
gtgggggaggaggttctctccagtctgaccccggcacagcaggtggtcaagatcgtcaac
gatgagctgatcgctctgatgggcaacgacaatgcccggatcaatatgccctccaagcct
ccctgcgtcattatgatgtgcggcttgcagggctccggtaaaaccacccacgctgcaaag
cttgcaaaatatttaaagcgggaagggcatcgccccctgctggttgcctgcgatatctac
cgtccggcggcgatcaaccagttgatggtagtgggagaaaaggctggggtcaaggtcttt
gaaatgggacagatcgacccggtggtgatctccacccaggccatgcgctatgccaaggat
tacggtcacgatgtggtcattctcgataccgccggccggctccacattgacgaaaagctc
atggatgagctgaagcagatcaaggcaaaggtggaacccaacgagatcatgctcgtggtg
gacgctatgaccggtcaggacgcagtcaacgtggcaaaggcatttgacgaggcgctgggc
atcgacagcgtgctcatgtccaagctggattccgatacaagaggcggtgcggcgctgtcc
gtgctggctgtgaccggcaagcccatcaaattcgtgggtatgggcgaaaagctggacgag
ttcgagcgtttccatccggagcgtatggcttcccggatcctgggcatgggggatgtgctg
accctggtggaaaaagcggaagcggtaatgagcaagagcgatgcggagaagctgaccaaa
aagctccaggagcattcctttgatatgaacgacctgttggatcagctcaagcagatccgg
aagatgggctctctcaagagcattatttccatgctccccggcgtgggggataaggtcaag
gatatggatgtggacgaaaagcagttcagccgcatcgaagccatgatcacctccatgact
aagaaggagcgtgcaaagccctccatcatcaacccccagcgcaagcggcggatcgccgcc
ggcagcggcaccaaggtggaggatgtgaaccggctgctcaagcagtttgagcagatgcag
cagtttatgaagcaaatggggggcggcggtaagaccaagatgtttgcccgccgggcaaga
aagcagcttgccggcatgaatttcgacaagatgggcaatccgggcggaaagctgcccttt
taa

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