Ruminococcus champanellensis: RUM_23880
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Entry
RUM_23880 CDS
T02600
Name
(GenBank) thymidine phosphorylase
KO
K00756
pyrimidine-nucleoside phosphorylase [EC:
2.4.2.2
]
Organism
rch
Ruminococcus champanellensis
Pathway
rch00240
Pyrimidine metabolism
rch01100
Metabolic pathways
rch01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
rch00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RUM_23880
Enzymes [BR:
rch01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.2 pyrimidine-nucleoside phosphorylase
RUM_23880
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_3
PYNP_C
Glycos_trans_3N
DUF2254
Motif
Other DBs
NCBI-ProteinID:
CBL18377
UniProt:
D4LFI2
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All DBs
Position
complement(2538502..2539821)
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AA seq
439 aa
AA seq
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MRAYDLIMKTRRGEPLTGAEIRFLVSGCVSGDIPDYQLSAWLMAVCFQSLTPAETLELTL
AMRDSGDRMDLSGIHGTTADKHSTGGVGDKTTLILAPVVAACGGYVPKMSGRGLGHTGGT
IDKLESIPGFSTAIPYDRFIDTVNRAGCAVVAQSGHLVPADKKLYALRDLTATVDSIPLI
CASIMSKKLAMGADCILLDVKTGSGAFMKTEQEAVQLGEAMVRTAKLAGKRCRAVVTDMD
MPLGSAVGNAIEVAEAISVLQGQRHTALGKLSLTLAAHMLTMCGRGTLEQCLAAAEQAVD
SGTALERFAWMLQCQGGDPAVAEHPERLPQPANSLTVTADRAGYLTRIASEEIGLAAMEL
GAGRRKAEDVLDPTAGLKLHCAVGDPVTPGMPLATLYATGVTDFSAAAVRVRGAMPIGEA
QPRVQPLLRQVIDTEGTAG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcatatgatctgattatgaaaacccggcggggggagccgttgaccggggcggag
atccgctttctggtcagcggctgcgtgtccggggacattccggactatcagctttccgcc
tggctgatggcggtgtgctttcagtccctgaccccggcggagaccctggagctgaccctt
gccatgcgggattccggagaccggatggatctgtccgggatccacggcaccacagccgac
aagcacagcaccggcggggtgggggataagactacgctgatcctggcgccggtggttgcc
gcatgcggcggctatgtgccgaaaatgtccggcagggggctgggccacaccggaggcacc
atcgacaagctggagagcattccgggcttttccaccgccattccctacgaccggttcatt
gacacggtgaaccgggcaggctgcgccgtggtggcacagagcggccatctggtgccggcg
gacaagaagctgtatgctctgcgggatctgaccgctacggtggacagcatccccctgatc
tgcgccagcatcatgagcaagaagcttgccatgggggcggactgcatcctgctggacgta
aaaaccggcagcggcgcctttatgaaaacggagcaggaggcggtgcagctgggggaggct
atggtgcgcaccgcaaagcttgccgggaagcgatgccgggcggtggtgacggatatggat
atgcccctgggcagtgccgtgggcaacgccatcgaggtggcggaggccatttccgtcttg
cagggacagcggcacacggcactgggaaaactgagcctgactttggctgcccacatgctc
accatgtgcggcaggggcaccctggagcagtgcctggcagcggcggagcaggcagtggat
tccggcaccgcactggagcggtttgcctggatgctgcaatgccaggggggcgatccggca
gtggcggagcatccggagcggctgccccaaccggcaaacagcttgacggtgacggcggat
cgggcagggtatctgacccggatcgccagcgaggagatcggtcttgcggctatggagctg
ggggcaggcaggcggaaggcggaggatgtgctggatcccaccgccgggctgaagctgcac
tgtgcagtgggggatccggtgacgccgggtatgccccttgccacgctgtatgccacgggc
gtgacggatttttccgccgctgccgtccgggtgcgtggggcaatgcccatcggggaggcg
cagccccgggtgcagcccttgctgcggcaggtgatcgatacggaggggacagccggatag
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