Ruminococcus champanellensis: RUM_24060
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Entry
RUM_24060 CDS
T02600
Name
(GenBank) Cohesin domain.
Organism
rch
Ruminococcus champanellensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin
SSP160
Dockerin_1
BPA
Phage_HP1_Orf24
Motif
Other DBs
NCBI-ProteinID:
CBL18394
UniProt:
D4LFJ9
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All DBs
Position
complement(2560433..2562502)
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AA seq
689 aa
AA seq
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MNHCMKTGLSADEGCRNPEELRLNNMIHHWIRTGLDRLRRTGAALTAAACALGLPGFFAR
QTPASAANLVLVYAESVEAQPGDTAQVSLYAEDNGGFSGMGLVLEYDGALELVTNEYGKP
LCTYGDLIGSDTCMILEAEGSKCGVAIASSQLIQQDGTLVTLSFRVPQTAQPGDTFALNL
TANAAYDNRDNAVSIQTYSGKIQIPQATTTTTTETTTTTTTTETTTAPTTTTAPAPVEFS
VGHASGLPGETVYLPVYVGPHSGISDMEFRLQLPEIFHSVLSNDEYQIVGIPSLWSIGSA
HNTTGGLALALNAGLNPDVTGELFRIQLVIPEDAAPGEYEISVQSVAIRNPEGTAYTCAA
APGSVQILMPETTTAESTTTTTMTTATTTTTTTATETTTAPGTPVEFSVGNVPGLPGETV
YLPVYVGENPGLSAAVLTFRYGGMLQPADANSTPQVQYLKAGYWGEVSYDTQLLTVSMHA
AWSQYENGEILRIPVAIPADAVPGIYPVTPESASFAAMDGSTRQCSLFAGTVQVVGAVTT
SAQVTENTTTTGYTTTATEAITTTETTIETTTTTTTEAITEATTTTAAETTITTTTTAAE
TTTVPIQTTTATRTTALQPGYLPGDVNMDGRVTVADAVLVLEACARMAAGEPCPLSDVQQ
KLGDLVPDGYIKVSDAVELLGIIARGIAG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaatcattgcatgaaaacggggctgtctgccgacgaagggtgcaggaatcccgaggaa
ttgaggttgaacaatatgatacatcattggatcagaaccgggttggatcggctccggcgc
acaggggctgccctgaccgctgccgcatgcgcattggggctgccgggattttttgcccgg
caaacccctgctagcgccgccaaccttgtactggtgtatgcggagtctgtggaggcacag
cctggcgacacggcgcaggtgtccctgtatgcagaggataacgggggcttttccggcatg
gggcttgtactggagtatgacggggcgctggagcttgtaaccaacgagtatggcaagccc
ctgtgtacctatggggatctgatcggctccgacacttgcatgatcctggaggcggagggc
agcaaatgcggcgttgccattgcctcctcccagttgattcagcaggatggcactcttgtg
accctttccttccgggtgccccagaccgctcagcccggggacaccttcgctctgaatctg
accgccaatgccgcctatgacaacagggacaatgcggtttccatccagacctacagcggc
aagatccagattcctcaagctactacaacgaccactactgaaaccaccactaccacaacc
accactgaaactaccaccgctccaacgaccaccaccgcccctgcgccggtggaattttcc
gtggggcatgcgtccggattgccgggggaaaccgtgtatctgccggtgtatgtgggaccc
cattccggcatttccgatatggagtttcgcctacagctgccggagatattccactctgtc
ttgtccaatgacgagtaccagattgtgggtataccgtccctatggagcataggttctgca
cacaataccaccggcggactggctttagcactgaacgccggattgaacccggatgtaacc
ggggaactgttccggattcagctggtgattccggaggatgcagcaccgggggaatacgag
atatccgttcaatcagtcgccatacggaatccggaggggacggcatacacctgtgcagcc
gctcccggctctgtgcagatcctgatgccggaaaccactacggcggaaagcactacgact
accaccatgaccactgccaccacgaccactaccaccaccgccactgaaaccaccactgcc
cccggtacgccggtggaattttccgtggggaatgtgcccggactgccgggggaaaccgtg
tatctgccggtgtatgtgggggagaatccgggcttgtccgctgctgtgctgaccttccgg
tacggaggcatgctccagcctgctgacgccaacagcacgccccaggtgcagtatctgaag
gccggctactggggggaggtcagctacgatacccaactgctgaccgtatccatgcatgcc
gcctggagtcagtatgaaaacggggagattctgcggatcccggtggcgattccggcggat
gcggtgccgggcatttatccggtgacaccggaatctgccagctttgcagcaatggatggg
agcacccggcagtgcagcctgtttgccgggacggtacaggtggtaggagcagtgaccacc
tccgcccaggtcacggagaataccaccactaccgggtataccacgaccgctacggaagct
atcaccacaacggaaaccaccattgaaacgactacaactaccacaacggaagctatcacc
gaagcgactacaactaccgctgctgaaaccaccataactactacaaccaccgctgcggaa
acaaccactgtgcccattcaaaccaccacagccacccggaccaccgccctccagccaggc
tatctgcccggagacgtgaatatggacggcagggtaacggtagcggatgcggtgctggtg
ctggaggcatgcgcccggatggcggcaggggagccctgtcctctgagcgatgtacagcaa
aagctgggggatctggtgccggatgggtacatcaaggtgtcggacgcagtggagctgctg
gggatcattgcacgggggatcgcagggtaa
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